| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_7396 |
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| Symbol | |
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| ID | 7380433 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011981 |
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| Strand | + |
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| Start bp | 369971 |
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| End bp | 370864 |
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| Gene Length | 894 bp |
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| Protein Length | 297 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 643641461 |
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| Product | Transcriptional regulator |
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| Protein accession | YP_002539758 |
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| Protein GI | 222102719 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.709918 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTGCATG GCACGACGAC GAAGGCGGCC GATGCCCTCG ACATCACCCA GCCAGCAGTT
AGCAAAATCC TGTTGCAGCT GACGAACAAG GCTGGCTTTC CGCTATTTCG CAACCATCGT
CAGCGTTTGA TCCCGACACC GGAAGCCCAC ATGCTCTATG CTGAGGTGCG CCGGTTGTTC
GAGACGGTTC GCGGAATATC GCAAATCGCG AAGGAAATCC GGGAGCTCCG GAGTGGCCGT
CTCAACATCT CAGCCCTGCC TGCTTTCGGG TCGACGCTGA TGCCTTCGAT CATTGCAAGC
TTCACGAAAC AATATCCCGA CGTCGCCATA ACCCTGGATA TCAGGAGCTC GTCGACAATC
ATCCAGCGGG CGGGGCGAAA TCAGCTCGAT ATCGGTGTCG CGTCAGAGGT CAACGATGAG
ACACCGTCGG TGGTTCGGCG TGCACTCATT GCCACCCCTC CGGTCTGCGT CATGCCCAAG
GGCCATCCGC TGAGCAAACT TTCCGTCGTC CAACCAGACG ATTTTGACGG CTTGAATTTC
GTGTCGTTGG GCGTCGGTGA TCCGATGCGC AAACAGCTTG ACGAACTCTG TGAGCAAAGA
GGGGTGAACC GCTCCCTCAA GGTTGAGGCG GCACTTTCGC ATTCCTGTAT TAATCTGGTT
GCCAACGGGG TTGGGGTGAC GGTGGTGGAT CGCCTTTCCG CTTGGATGGC AAAAGACCTG
CCAATTGAGA TCCGCGACTT CCAGCCGCAT CTCGACATCA ATCTTAGCGT CTATAGACCA
TGGGGCACAA TCGCCTCGTC TGTGGCCGAC ACCTTCATCG AGCATCTTAT CCAGTCGACG
CGGGAATATA TGAACGTCGT TGACCGTGGG ATCAAAGCCC TCAGCGAGCA GTAA
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| Protein sequence | MLHGTTTKAA DALDITQPAV SKILLQLTNK AGFPLFRNHR QRLIPTPEAH MLYAEVRRLF
ETVRGISQIA KEIRELRSGR LNISALPAFG STLMPSIIAS FTKQYPDVAI TLDIRSSSTI
IQRAGRNQLD IGVASEVNDE TPSVVRRALI ATPPVCVMPK GHPLSKLSVV QPDDFDGLNF
VSLGVGDPMR KQLDELCEQR GVNRSLKVEA ALSHSCINLV ANGVGVTVVD RLSAWMAKDL
PIEIRDFQPH LDINLSVYRP WGTIASSVAD TFIEHLIQST REYMNVVDRG IKALSEQ
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