Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avi_7388 |
Symbol | nrdF |
ID | 7380426 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Agrobacterium vitis S4 |
Kingdom | Bacteria |
Replicon accession | NC_011981 |
Strand | + |
Start bp | 362792 |
End bp | 363781 |
Gene Length | 990 bp |
Protein Length | 329 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 643641454 |
Product | ribonucleotide-diphosphate reductase subunit beta |
Protein accession | YP_002539751 |
Protein GI | 222102712 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0208] Ribonucleotide reductase, beta subunit |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACATAC AGATGAAGAC CAACACCCCG ACGCAAACCA AGCCGGTGCG AGCGATCAAC TGGAACCGCA TCAACGACGA CAAGGACCTG GAGGTCTGGA ACAGGCTGAC CGGTAATTTC TGGCTGCCGG AGAAGGTGCC GTTGTCAAAC GACATTCCAT CCTGGGCGGC GTTGAAGCCG GAAGAACAAC AGTTGACCAT CCGCGTCTTC ACGGGGCTGA CCCTGCTCGA TACCATACAG ACGAGCATCG GTGCGCCAAC ATTGATGGAG GATTCCATCA CGCCGCATGA GGAGGCGGTC TATTCGAACA TTTCGTTCAT GGAAGCGGTG CATGCCCGTT CCTATTCCTC GATCTTTTCG ACCCTGTGTT CGACATCCGA CGTGGATGAT GCCTATCGCT GGTCCGAAGA AAACGAGTTT CTGCAAAAGA AGTCGGCGCT GATCCTCGAA CACTACCGCA ATCCTGACCC GCTGAAACGC AAGATCGCCA GTGTGTTCCT GGAAAGCTTC CTGTTTTACT CCGGCTTCTA TCTGCCGATG TTTTGGTCGA GCCGCGCCAG GCTCACCAAC ACGGCAGACA TGATCCGTCT CATCATCCGC GACGAGGCTG TACATGGCTA TTACATCGGC TACAAGTTTC AGCGTGGTCT CGAGCCCTTA AGCGAGGAGC AGCGGCAGGA AACCAAGGAC TTCGCCTTCG ACCTGCTGCT TGAGCTCTAC GACAACGAGG CCAAATACAC CGAGGCGCTC TATGACGGTG TCGGACTGAC AGAGGACGTC AAAAAATTTC TGCATTACAA CGCGAACAAG GCGCTGATGA ACCTCGGCTA CGAGGCTCTG TTTCCGCCGG AGGCCTGCAA GGTCAATCCG GCAATCCTGT CGGCACTCTC GCCGAATGCC GATGAGAATC ATGATTTCTT TTCGGGCTCA GGCTCGTCCT ATGTCATCGG CAAGGCAGTT GCGACTGAGG ACGAGGACTG GGATTTTTAA
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Protein sequence | MNIQMKTNTP TQTKPVRAIN WNRINDDKDL EVWNRLTGNF WLPEKVPLSN DIPSWAALKP EEQQLTIRVF TGLTLLDTIQ TSIGAPTLME DSITPHEEAV YSNISFMEAV HARSYSSIFS TLCSTSDVDD AYRWSEENEF LQKKSALILE HYRNPDPLKR KIASVFLESF LFYSGFYLPM FWSSRARLTN TADMIRLIIR DEAVHGYYIG YKFQRGLEPL SEEQRQETKD FAFDLLLELY DNEAKYTEAL YDGVGLTEDV KKFLHYNANK ALMNLGYEAL FPPEACKVNP AILSALSPNA DENHDFFSGS GSSYVIGKAV ATEDEDWDF
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