Gene Avi_7386 details

Gene Information

• Locus tag: Avi_7386
• Symbol: nrdI
• ID: 7380424
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Agrobacterium vitis S4
• Kingdom: Bacteria
• Replicon accession: NC_011981
• Strand: +
• Start bp: 360238
• End bp: 360654
• Gene Length: 417 bp
• Protein Length: 138 aa
• Translation table: 11
• GC content: 55%
• IMG OID: 643641452
• Product: ribonucleotide reductase stimulatory protein
• Protein accession: YP_002539749
• Protein GI: 222102710
• COG category: [F] Nucleotide transport and metabolism
• COG ID: [COG1780] Protein involved in ribonucleotide reduction
• TIGRFAM ID: [TIGR00333] ribonucleoside-diphosphate reductase 2, operon protein nrdI

Plasmid Coverage information

• Num covering plasmid clones: 7
• Plasmid unclonability p-value: 0.320547
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGGGCTGA TTGTCTATTT TTCCAGTGCC TCGGAAAACA CCCATCGCTT TGTCGGCAAG 
CTTGGTTTGC GCGCGTCACG TATCCCCGTC AGCCCGCGGA GCGGCAATCC GTCGATCACT 
GAACCTTACG TTCTAATCGT CCCAACCTAT TCGGGTGACG ATGGCAAAGG GGCCGTTCCA 
AAACAGGTCA TCCGCTTCCT CAATGATGCG GACAACCGCT CTCATCTCCG GGGCGTGATC 
GCCGCGGGCA ATAGTAATTT CGGCGAGACG TTCTGTCTCG CCGGCGACGT GATCTCACAG 
AAATGTCGAG TGCCGTACCT TTACAGGTTC GAACTGCTCG GCACGGACGA AGATGTCGCC 
AATGTCAAAT ATGGGATGGA ACGATTTTGG ATGTCACAAC TTTCGAGCGC CCTTTGA 

 

Protein sequence

MGLIVYFSSA SENTHRFVGK LGLRASRIPV SPRSGNPSIT EPYVLIVPTY SGDDGKGAVP 
KQVIRFLNDA DNRSHLRGVI AAGNSNFGET FCLAGDVISQ KCRVPYLYRF ELLGTDEDVA 
NVKYGMERFW MSQLSSAL