| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_7384 |
|---|
| Symbol | nrdH |
|---|
| ID | 7380423 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Agrobacterium vitis S4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011981 |
|---|
| Strand | + |
|---|
| Start bp | 359928 |
|---|
| End bp | 360227 |
|---|
| Gene Length | 300 bp |
|---|
| Protein Length | 99 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 643641451 |
|---|
| Product | glutaredoxin protein |
|---|
| Protein accession | YP_002539748 |
|---|
| Protein GI | 222102709 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0695] Glutaredoxin and related proteins |
|---|
| TIGRFAM ID | [TIGR02194] Glutaredoxin-like protein NrdH |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.405165 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCTAGAA ACGAGCGTCG GCAACGACGT CTTCGGAGGC CTTTCTGCGG CCAAAAATCA
AAACCCAACG AGGATATGAT GACCATCACC GTTTACAGCA AACCTGCCTG CGTCCAGTGC
AGCGCAACCA CCCGCGCGCT CGATCGTCAG GGCCTCGACT ACCACATCGT CGACATTTCC
GTCGATGAGG ACGCCTATGC CAAGGTTCAA GGTCTTGGCT ATCGGCAGGT TCCCGTCGTC
ATCGCTGGCG ATACCCATTG GGCGGGTTTT CGTCCCGACA TGATCAACGC GTTGGCGTAA
|
|---|
| Protein sequence | MSRNERRQRR LRRPFCGQKS KPNEDMMTIT VYSKPACVQC SATTRALDRQ GLDYHIVDIS
VDEDAYAKVQ GLGYRQVPVV IAGDTHWAGF RPDMINALA
|
|---|
| |