| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_7382 |
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| Symbol | |
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| ID | 7380422 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011981 |
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| Strand | - |
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| Start bp | 358001 |
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| End bp | 358990 |
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| Gene Length | 990 bp |
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| Protein Length | 329 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 643641450 |
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| Product | transcriptional regulator AraC family |
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| Protein accession | YP_002539747 |
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| Protein GI | 222102708 |
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| COG category | [K] Transcription |
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| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.152867 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCTGATC ATTCGTCTCA ACGGTTGTCG CCGTCAAATA TCCCAATGGA TGCGCTAAGC
GAAGTTCTAC AGGACTTTCG CTTGAGTGGG GTCAATTATG GGCGCTGCGA ACTGCGGCAT
CCGTGGAGCA TCGCCTTGCC GCACCAGCAG CTGCTTCGAT TCCACTTTGT CAGCCAAGGT
CCATGCTGGA TTCATACCGA AGCCCAAGGG TGGCAGGAAT TGAATGATGG GGATCTGGTG
CTACTGCCGC AAGGTATCGC ACATCGGTTG GCAAGCGCGC CGGATGTTGA AGGCGACTCG
CTCAAAAGCT GTCAGATAAA AAGGTTGAGC AACAAGGTTT GCGAGTTGGT GCGGGAAGGA
ACGGGGGCGA CCAGCACTCT TTTCTGCGGT TCCATGGCTT TGAGCGCATA TGCCCTTGAT
CCTTTGATCG CCTTGATGCC GCCAATCATC AAGGGCTGCG ATGTCGCTGG CAATGACCCG
GTTATTGGCC CCCTGCTGGC GGCTATGACG GCAGAGGCTT CGCAGCCTCA GATGGGCAGC
GCGACGATCC TGTCGCGTAT GGCTGACTTG CTCGTTGCGC GGCTTATCCG CTGTTGGGTC
AATTGCAGCG GAGCCGCAAC CACCGGCTGG CTCGCCGCCA TCCGCGACCC TCATCTTGGT
CGTGTATTGG CCGCCATGCA CCGCGATCCG GGCCATAACT GGACGCTTGA AAGCCTTGCC
GGTGTGGCGG GCCAATCGCG CTCGATTTTT GCCGAACGCT TCAGCGCTAT TTTAGGAGAA
GGCGCGGCAC GCTATCTCGC CCGCCTGCGC ATGCAGCTTG CCCGTGAGTT GTTGGGGCAA
GGTGGCATGT CGGTTGCCGA GGTTGCATCT CGCCTGGGCT ATGAATCTGA GGCGTCTTTC
GCCCGCGCTT TCAAACGGAT TACCACGCTC TCCCCGGGCG TTGTGCGCCG CACAGTTTCC
GGACGAACGG ACATGGTTTT CGGATTTTAA
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| Protein sequence | MSDHSSQRLS PSNIPMDALS EVLQDFRLSG VNYGRCELRH PWSIALPHQQ LLRFHFVSQG
PCWIHTEAQG WQELNDGDLV LLPQGIAHRL ASAPDVEGDS LKSCQIKRLS NKVCELVREG
TGATSTLFCG SMALSAYALD PLIALMPPII KGCDVAGNDP VIGPLLAAMT AEASQPQMGS
ATILSRMADL LVARLIRCWV NCSGAATTGW LAAIRDPHLG RVLAAMHRDP GHNWTLESLA
GVAGQSRSIF AERFSAILGE GAARYLARLR MQLARELLGQ GGMSVAEVAS RLGYESEASF
ARAFKRITTL SPGVVRRTVS GRTDMVFGF
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