| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_7366 |
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| Symbol | rbsC |
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| ID | 7380408 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011981 |
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| Strand | + |
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| Start bp | 342479 |
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| End bp | 343456 |
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| Gene Length | 978 bp |
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| Protein Length | 325 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 643641436 |
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| Product | ABC transporter membrane spanning protein (ribose) |
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| Protein accession | YP_002539733 |
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| Protein GI | 222102694 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1172] Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCGCCT CTTCATCCGC CGCCAGCCAA TCGGTCCCGA CCTTTCGCCG GTTTTCCGTC
TCGTTGCGTG ATGCCGGAAC GCTGATCGGC CTCATCGTCA TCATGGCGGT ATTTGCAGCG
CTCGTTCCCG GCTTCCTGTC GGAGCGCAAT CTGACCAATA TTCTCCAGCA ATCCAGCATC
AATGCCTGCC TGGCGCTGGG CATGACGCTG GTGATCATTT CAGGCGGCAT CGATCTATCG
GTCGGGCCGA CCGCTGCCAT TGCCGCCGTG ATGACCGCGA CGCTGCTGCT GGGTGGAACG
CCCATCCCTT TGGCGATCCT CGCCGGGCTT GGTGTCGGCG CGGTATGCGG CTTTATTAAT
GGCGTGCTTG TCGCCTATAT CGGCCTGCAA CCCTTCATCG TGACGCTGGG GACACTGAGC
ACCTACCGAG CCATCGCGCT GATCTTCACC GGTGGCAATC CGGTGCTGGG CATTCCGCCC
GGCTTTCGGG CGCTATTCAA TGGAACCCTG ATCGGCCTGC CAATCCCGGT GCTGATCGTT
GCCGGTGTTT CGGTCGCCGC CTGGGTGCTG CTCAAGAAGA CGCCGATCGG TGAATACCTG
ATGGCGGTTG GCGGCAATGA GGAAGCGGCT TACGTGGCAG GCGTTCCAAT CGCCCGTACC
AAGATCACCG CCTATGTGAT TTCCGGCGGG CTCGCCGCAC TTGCCTCCCT TATCCTGATT
GGCCGTCTTG GCGCGGCCGA GCCCATTCTC GGCAATCTCT GGGAGCTGGA TGCAATCGCA
GCAGCGGCGA TTGGCGGTGC ATCGCTGATG GGCGGCAAGG GCAGTATTGT CGGCACCATT
CTCGGCGCCA TTATCCTGGG TGCCATGCGC AATGGTTTGA CGCTGATGAA TGTCCAGGCC
TTCTATCAAC TGCTCGCCAC CGGCCTTATA ATCCTCGTCG CAATGATGAT TGATCGCGCG
ACAAGGGGAC GGGAATGA
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| Protein sequence | MTASSSAASQ SVPTFRRFSV SLRDAGTLIG LIVIMAVFAA LVPGFLSERN LTNILQQSSI
NACLALGMTL VIISGGIDLS VGPTAAIAAV MTATLLLGGT PIPLAILAGL GVGAVCGFIN
GVLVAYIGLQ PFIVTLGTLS TYRAIALIFT GGNPVLGIPP GFRALFNGTL IGLPIPVLIV
AGVSVAAWVL LKKTPIGEYL MAVGGNEEAA YVAGVPIART KITAYVISGG LAALASLILI
GRLGAAEPIL GNLWELDAIA AAAIGGASLM GGKGSIVGTI LGAIILGAMR NGLTLMNVQA
FYQLLATGLI ILVAMMIDRA TRGRE
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