| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_7365 |
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| Symbol | rbsA |
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| ID | 7380407 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011981 |
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| Strand | + |
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| Start bp | 340939 |
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| End bp | 342459 |
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| Gene Length | 1521 bp |
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| Protein Length | 506 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 643641435 |
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| Product | ABC transporter nucleotide binding/ATPase protein (ribose) |
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| Protein accession | YP_002539732 |
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| Protein GI | 222102693 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1129] ABC-type sugar transport system, ATPase component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.568459 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTGCCGA GACTGGGATT TGAAACAATC TCCAAGAGCT TTCCGGGCGT CAACGCGCTG
ACGGATGTGA GCTTCGATGT TGCTCCCGGA GAAATTCACG GGCTGCTGGG TGAAAACGGC
GCCGGAAAAT CAACGCTTCT GCGCATTCTG TCCGGCGTCT TCCGGCCAAC CTCCGGCAGT
GTTTTCGTCG ATGGCGAAGC TGTCGCGTTT CGCAAGCCGC TGGATGCAAG ACAGGCTGGC
ATTGCGATGA TCCATCAGGA ACTTCAACAG GTGCCGCATC TGAGTGTTGC CCAGAACATG
TTTCTTGGCC ATTCGCTGAC CCATATGGGC GGGCTTTTCG TTTCGCGCCG GGAGCAGGAA
CAGCGGGCCG CCGAAGCGCT GTCGATGATC GACCGCAGCA TCGACGTTTC CGCGCCCATC
TCCAGCCTGA AAGTCGCGCA GCGGCAGATT GTCGAGATCG GCCGCGCCCT GCTCGACAAG
GCCAAGGTCA TCGCCATGGA TGAGCCGACC TCCAGCTTGA CGCCGAGCGA GTTCGACCGG
CTGGCTGAGG TGATTGCCGA TCTCTCGGCC AGCGGCGTGT CGATTATTTA TGTTTCGCAT
AAGATGGACG AGGTTTTCCG TATCTGCCAG CGCGCCAGCG TCATGCGAGA TGGCAAGCTC
GTTGGCATCG TTGACATGAA AACCACATCG GAAAAACAGG TCATTGCCAT GATGGTCGGG
CGTGAACTGA TGCAGGAAAC CCATCATTCC TTCGTAACTG ATCAGGTCAG ACTGCAAGCC
AGCAATCTGT CTTCAGCCAC CAAGATCAAA AATGTCTCCT TCACCTTGAA AAGGGGTGAA
GTGTTGGGCA TTGCCGGGCT GGTCGGCTCG GGGCGCACGG AATTGCTGCG GCTGATCGCC
GGTGTCGATC GTCTGAGCGA GGGGTCTATT ACCATCGATG GCAAGAGTGT CAGCCTGCGC
AATCCCCGTG ACGCAATTGC CGCAGGTATC GGCCTTGTGC CGGAAGAGCG CAAGCGCGAA
GGCATTATCC CCTTGCGCCC GGTCAGCTTG AACATGGCGC TGGCTTCGCT TCCCAGCTTT
TCCGCTGCCG GTCTGATCCG CACCGGAAAA CTGCGCGCCA GCGCGCAGGA TTTGCTGAAG
CGTGTCAACC TGCGGCCGTT TCAGCTTGAT CGTCCTATCC GTCTGTTCAG CGGCGGCAAC
CAGCAAAAGG CCATTATTGC ACGCTGGCTG GCGGCCAAAT CGCAGATCCT GCTGTTCGAT
GAGCCGACAC GCGGCATCGA TGTCGGGGCA AAATCCGAGA TCTACCAATT GATCGAAGCC
CTGGCCCGCG AAGGCCATTC GATCATCGTC GTTTCCTCCG AGCTTCCCGA AGTCATCCGG
CTCTCCGACC GCGTGCTGGT GATGCGGGAA GGCCAGATCG CCGCTGAAAT CGCGCGCGAC
CAGCTGACGG AAAGCGCCAT TCTCGCCCAC GCCATTCCAG GAGCGAGTGC CGGTGCTACC
GCCATCGCAC ATCCTGCATA A
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| Protein sequence | MVPRLGFETI SKSFPGVNAL TDVSFDVAPG EIHGLLGENG AGKSTLLRIL SGVFRPTSGS
VFVDGEAVAF RKPLDARQAG IAMIHQELQQ VPHLSVAQNM FLGHSLTHMG GLFVSRREQE
QRAAEALSMI DRSIDVSAPI SSLKVAQRQI VEIGRALLDK AKVIAMDEPT SSLTPSEFDR
LAEVIADLSA SGVSIIYVSH KMDEVFRICQ RASVMRDGKL VGIVDMKTTS EKQVIAMMVG
RELMQETHHS FVTDQVRLQA SNLSSATKIK NVSFTLKRGE VLGIAGLVGS GRTELLRLIA
GVDRLSEGSI TIDGKSVSLR NPRDAIAAGI GLVPEERKRE GIIPLRPVSL NMALASLPSF
SAAGLIRTGK LRASAQDLLK RVNLRPFQLD RPIRLFSGGN QQKAIIARWL AAKSQILLFD
EPTRGIDVGA KSEIYQLIEA LAREGHSIIV VSSELPEVIR LSDRVLVMRE GQIAAEIARD
QLTESAILAH AIPGASAGAT AIAHPA
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