| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_7362 |
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| Symbol | |
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| ID | 7380570 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011981 |
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| Strand | + |
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| Start bp | 338738 |
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| End bp | 339718 |
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| Gene Length | 981 bp |
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| Protein Length | 326 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 643641433 |
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| Product | xylose isomerase |
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| Protein accession | YP_002539730 |
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| Protein GI | 222102691 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG4952] Predicted sugar isomerase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.730487 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGACCCAGC TGAAATTTGC AACCCGCCTG AATTCCTTTG CCTCCTGCCC AAAGGCAGAA
TGGCCGGACC TGTCCGGCAA GCCGACCATG CTGCAAATGG TAAAGCGTGC CGCAAAAGTC
GATGGGCTAA CGGATCTCGA TCTCAATTAT CCCGATCATG TTGGCGAAGA TCCTGCTGTT
TTGGCCCGCC AGATTGGCGA TACGGGCCTG GCAATCAATG GGTTCGCCAT GCGCTATTAC
ACCAATTCCG CCTTCAAGAT CGGCGCATTC ACCAATCCAG ACCCCGAGGT CCGGCGGGAA
GCCATCGATC TCACCAAGGC CGGTATTGAC GCAGCCCGTG CAGCAGGCAG CCGGTTGATG
ACGCTCTGGC TCGGCCAGGA TGGGTTCGAT TATGCCTTCC AGGCGGATTA TCACACCCTG
TGGCAACACG AAATTGATGG AATCCGTGAA GTTTGCGCCC ATGACCCGGA TTGCCAGATC
AGCATCGAGT ACAAGCCGAA CGAACCTCGG TCCTACAGCC TGATGCCAGA TGCGGCAACG
ACATTGCTGG CCATCAGGGA TGTCGATATG CCCAATCTTG GTGTGACGCT GGACTTTGCC
CACGTTCTCT ACGCCGATGA ACAGCCAGCC TTTGCCGCCG CCCTGATTGC CCGCCATAGC
CGCGTTCTCG GTGTGCATCT GAACGATGGC TATGCCAAGC GCGACGATGG CCTGATGGTG
GGCGCGGTCC ACACCCAGCA GACCATCGAG CTTCTGCGCC AGATCCGCAA GGACGGCTAC
GATGGCGCTA TCTACTTCGA CACGTTCCCG GACATGACGG GTCTCGATCC CGTCCACGAA
TGCGAGGTCA ATATCCAGAC CGTCAAGCGC ATGTTGCGGA TTGTCGATCG CCTCGATCAG
GACAATCGTC TTTCGGGCGC CATCGACCGT CAGGATGCCG TGTCCGCGCA GGCCATCGTT
CAGGAACTGA TGCTGGGCTA A
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| Protein sequence | MTQLKFATRL NSFASCPKAE WPDLSGKPTM LQMVKRAAKV DGLTDLDLNY PDHVGEDPAV
LARQIGDTGL AINGFAMRYY TNSAFKIGAF TNPDPEVRRE AIDLTKAGID AARAAGSRLM
TLWLGQDGFD YAFQADYHTL WQHEIDGIRE VCAHDPDCQI SIEYKPNEPR SYSLMPDAAT
TLLAIRDVDM PNLGVTLDFA HVLYADEQPA FAAALIARHS RVLGVHLNDG YAKRDDGLMV
GAVHTQQTIE LLRQIRKDGY DGAIYFDTFP DMTGLDPVHE CEVNIQTVKR MLRIVDRLDQ
DNRLSGAIDR QDAVSAQAIV QELMLG
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