| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_7357 |
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| Symbol | |
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| ID | 7380566 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011981 |
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| Strand | + |
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| Start bp | 335160 |
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| End bp | 336269 |
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| Gene Length | 1110 bp |
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| Protein Length | 369 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 643641429 |
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| Product | ABC transporter membrane spanning protein (sugar) |
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| Protein accession | YP_002539726 |
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| Protein GI | 222102687 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1175] ABC-type sugar transport systems, permease components |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.507448 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCCGACA CGACCATGCC TGCCATTCGC CCGATTGAAG GGGCATCGCT ACGGCAAACC
GGTGCCCGGC GTGGTCGCCT GCTGCTGGCG GTGGCCACCG TGCTGCTGCT TGGCGTACTC
GTTCTGCAAA TTCTCGATGC AGCCGGGGTG ACCTCGCTTG GTCTCGTCAG TTGGCGTCCC
TTGCTCTATG CCTATATCGT CTGGGCCGTG GCTCTGTGCG CCGCGCAAAT CATGATCCGG
GGCGAAGCTG GCCAGCGGGC CGTGTTCGTT CTACCGGCGG TGCTGTTTAC GGTGGCCATG
GTGGTATTTC CCACGGTGTT CGGCCTCTAC ATTGCCTTCA CAGACTGGAA CCTCAGCGCT
GCCGCAGGAC GGCGTTTCAA TGGCATCGAC AACCTGCGCA CGCTGTTTGC CGACTTTTAC
TTCTGGAACG CGCTGTTGAA CATGGTCTAT TATGTTCTGG CGGTTCTTGT GCAATATGCC
ATTGCCTTTG GCCTCGCGCT GCTTTTGAAC GCCGAAATCA AGGCCCGGAA GTTCTTTCGC
GTCGCCTTCC TTCTGCCGCT GATGTTGAGC CCGGTTGCCG TCAGCTGGAT GATCGGCAAA
TCGCTGATGG AATATCGCTT CGGCCCGGCG GCAACGCTTG CCCGGCATCT CGGATGGGAC
AACCCGGCGT TTTTCTCGAC CCCATGGCTT GCCCGTCTCT CGCTGATGGC CATGGATGCC
TGGGTCTCGA TCCCCTTCAT GATGATCCTG CTTCTGGCCG GGCTTCAGGC CTTGCCAACG
GAGATTAAGG AGGCCGCCAA GGTCGATGGC GCTTCCGGCT GGCAGAGCTT CAAGGAAATC
ACCTTTCCGC TGATGCTACC GGTCAGCGTC ACCGTGATTA TCCTGCGGAT CATTTTCCAG
TTGAAGCTTG CCGATATCGT CATCAATGTC ACAGCAGGCG GACCCGGCGG CGCGACAGAT
ACGGTCTCCA GCTTCATCTT CCGGGAATAT CGTGACCGCT CGAATGTCGG CTACGGCACC
ATGCTGGCCG AGTTCTATCT CGTCATCATC ATTATCTTCG TCTCGCTCAT CCTCAAGGTG
ACGAGCCGCT GGCTGCAACG TTCCAACTGA
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| Protein sequence | MSDTTMPAIR PIEGASLRQT GARRGRLLLA VATVLLLGVL VLQILDAAGV TSLGLVSWRP
LLYAYIVWAV ALCAAQIMIR GEAGQRAVFV LPAVLFTVAM VVFPTVFGLY IAFTDWNLSA
AAGRRFNGID NLRTLFADFY FWNALLNMVY YVLAVLVQYA IAFGLALLLN AEIKARKFFR
VAFLLPLMLS PVAVSWMIGK SLMEYRFGPA ATLARHLGWD NPAFFSTPWL ARLSLMAMDA
WVSIPFMMIL LLAGLQALPT EIKEAAKVDG ASGWQSFKEI TFPLMLPVSV TVIILRIIFQ
LKLADIVINV TAGGPGGATD TVSSFIFREY RDRSNVGYGT MLAEFYLVII IIFVSLILKV
TSRWLQRSN
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