| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_7356 |
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| Symbol | |
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| ID | 7380565 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011981 |
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| Strand | + |
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| Start bp | 333642 |
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| End bp | 335015 |
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| Gene Length | 1374 bp |
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| Protein Length | 457 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 643641428 |
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| Product | ABC transporter, binding protein |
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| Protein accession | YP_002539725 |
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| Protein GI | 222102686 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1653] ABC-type sugar transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.768559 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGCCTGA ACAATCAGAA TCTGCACAAT GTGCTGTTTC GCGGTTTCCT GAAGCCCTGG
GAGGATTATA CCGGTGCCAA GATCACCTGG ATCGACCTGG CCCAGGCCGA TTACAATCCC
CGCCTTCAAC AAGCGATTGC CACCGGCACC GTGGATTTTG ACCTTCTGGA AATGGGCGCT
CCGTTTGAAG GCGATGTTTG CGGCAAGGGC CTTGCCTCGG AAATGCCGGA CTGGGTGAAG
GCCCAGATCG ACATGGAGGA TTACGTCGAT TACCTGAAGG CCCCGGTCGG CACCTGGGGT
GGCAAAGTCT ACCGCGTCTC GGTGGATGGC GATTGCCACA ACTTCAACTA CCGTAAGGAT
TATTTCACCG ACGCCGATCT CGCCAAGGCC TGGAAAGCTG AAGGCCATGC CGGCGAATGG
GGCGTGCCGA AAACCTGGCA GCAGGTGCAG GAAGCAACCA AGTTCCTCAA AGGCAAGACA
ATCGCCGGAG CCGATGCCAT CGGCTATCTC GATGCACCAA AGGCCTGGGG TGGCTTTGGC
TTCTACTTCC TCGGCAGCCG CGCAACGGCC TATGCCAAGC ACCCGGATGA CAAGGCCTGG
CTGTTCGACA TCGATACGAT GAAGCCGCGC ATCAACAATC CTGCCTGGGT GCGCGCCATC
CAGGACGTTG TCGATGCCCT ACCTTCCGAA GCCGGTGACC AGTTGAACGC CGATCCCGGC
ACGACGGCGT TCCAGCAGTT TCTGGCCGGA ACCGGCTCCA TGGTCTCCTG GTGGGGCGAT
GTCGGGCAAA GCGCCCAAAC CAGCGATAGT TCGGTGGTGG GCGATACCAT CGCCTTCGAC
ATTCTTCCCG GCTCCGACGA TGTCTATAAT GCCAAGACCG GGAAATGGGA GACGCTGGCC
AGCGGGCCGA ACTATGCGCC CAACATGGCC TATCTGGGCT GGGGCGTTTA CGTCATGGCC
CGTGTTGACA AGGATGAGAA GAAAAAGAAG GCAGCCTGGA GTGCGGCGGC CCATCTCGGC
GGCAAGGATC TCGCCTTGTG GACGGCGGCC TATCCCTCCG GCTTCCAGTG CTATCGCAAG
AGCCAGTTCG ATATCAAGGA ATGGGTGGCC GCAGGCTATG AGGAGGCGTT CATCAGCAAT
TATCTCGCCT CCCAGTCGAA GTCCTACAAC CATCCGAACG CCGCCATCGA ACCCCGTATT
CCTGGTATCT TCCAATATTA CAGCGTGGCG GAAGACGAAT TGGCAAAAGT GTTTGCGGGA
AGGGTGAAGC CCCAGGAAGG TGCCGATGCG ATTGCGGCGG CCTGGGAAAA AATCACCGAT
CAGCTTGGCC GCGACAAGCA GATATCACTC TACAAGGCCT CGCTCGGCGT TTGA
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| Protein sequence | MGLNNQNLHN VLFRGFLKPW EDYTGAKITW IDLAQADYNP RLQQAIATGT VDFDLLEMGA
PFEGDVCGKG LASEMPDWVK AQIDMEDYVD YLKAPVGTWG GKVYRVSVDG DCHNFNYRKD
YFTDADLAKA WKAEGHAGEW GVPKTWQQVQ EATKFLKGKT IAGADAIGYL DAPKAWGGFG
FYFLGSRATA YAKHPDDKAW LFDIDTMKPR INNPAWVRAI QDVVDALPSE AGDQLNADPG
TTAFQQFLAG TGSMVSWWGD VGQSAQTSDS SVVGDTIAFD ILPGSDDVYN AKTGKWETLA
SGPNYAPNMA YLGWGVYVMA RVDKDEKKKK AAWSAAAHLG GKDLALWTAA YPSGFQCYRK
SQFDIKEWVA AGYEEAFISN YLASQSKSYN HPNAAIEPRI PGIFQYYSVA EDELAKVFAG
RVKPQEGADA IAAAWEKITD QLGRDKQISL YKASLGV
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