Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avi_7343 |
Symbol | |
ID | 7380555 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Agrobacterium vitis S4 |
Kingdom | Bacteria |
Replicon accession | NC_011981 |
Strand | - |
Start bp | 323232 |
End bp | 324341 |
Gene Length | 1110 bp |
Protein Length | 369 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 643641418 |
Product | ABC transporter nucleotide binding/ATPase protein |
Protein accession | YP_002539715 |
Protein GI | 222102676 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG3839] ABC-type sugar transport systems, ATPase components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.88464 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCAAGCA TTTCGCTGAA AAAGCTCAAC AAATCCTTCG GTGCACTGAA AGTGGTGCAC GATATCGACC TTGAGATCGC CGACAAGGAA TTCATCATTC TCGTCGGACC GTCCGGCTGC GGCAAATCCA CCACGCTCAG AATGATTGCG GGGCTTGAGG AGATCTCCGG CGGGCAATTG CTGATCGGCG AGGACCTGAT GAATGACGTG CCGTCAAAGG ACCGCGACAT TGCCATGGTT TTCCAGAATT ATGCGCTCTA TCCGCATATG ACTGTCTACA AGAACATGGC GTTCGGACTT GAGCTGCGGA AAGCGCCGCG CGATGTGATC GAGACAAAAG TCCAGGAAGC GGCAAAGATC CTCGACATCA CCCATCTTCT GAACCGCAAG CCCAAGGCAC TGTCGGGAGG CCAGCGGCAG CGCGTGGCGC TGGGCCGTGC GATGGTGCGC AATCCGGAAG TGTTTCTGCT CGACGAACCG CTGTCCAACC TCGATGCCAA GCTACGCGGC ACGATGCGCG CCGAAATATC CAAGCTGCAT AAGCGGCTGA ACGCCACCTT CATCTACGTG ACCCATGATC AGGTAGAGGC CATGACCATG GCCGACCGTA TCGTTGTCAT GAAGGATGGC CACATCCAGC AGGTCGATAC GCCGCAGCGG CTCTATGACC ATCCGATCAA CATGTTTGTG GCGGGCTTTA TCGGTGCGCC GCAGATGAAC ATGCTGCCCT CGACGATCCG GCGCCAGGAG GATGGTTTCG TCGCCGTCTT CAACGATCAT GCCCTACCCT TGCCGAACAC CTTCGACCAG AGCCGCATCG CGCCCTATCT GGACCGCGAC ATCATTCTGG GCATACGGCC TGAAAACTTT CATGAACTGG CACCGGGCGA TATCGACCCT GCCAATACGG CACCCTTTGA GGCGGTCGTT GAATTGGCCG AACCGATGGG CTCGGAAGTG CATCTCAATC TCGTCGTTGC CGGACGCTCG GTCGTTGCCC GCGTGTCACC GCGCTTCAAG GCCAGGCTTG GTGAGCAGGT GCGCCTCACC GCCGACATGA CCAATGCGCA ATTGTTCGAT CCGCAAACCG AGCGGTCGAT CCTTTACTGA
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Protein sequence | MASISLKKLN KSFGALKVVH DIDLEIADKE FIILVGPSGC GKSTTLRMIA GLEEISGGQL LIGEDLMNDV PSKDRDIAMV FQNYALYPHM TVYKNMAFGL ELRKAPRDVI ETKVQEAAKI LDITHLLNRK PKALSGGQRQ RVALGRAMVR NPEVFLLDEP LSNLDAKLRG TMRAEISKLH KRLNATFIYV THDQVEAMTM ADRIVVMKDG HIQQVDTPQR LYDHPINMFV AGFIGAPQMN MLPSTIRRQE DGFVAVFNDH ALPLPNTFDQ SRIAPYLDRD IILGIRPENF HELAPGDIDP ANTAPFEAVV ELAEPMGSEV HLNLVVAGRS VVARVSPRFK ARLGEQVRLT ADMTNAQLFD PQTERSILY
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