| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_7343 |
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| Symbol | |
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| ID | 7380555 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011981 |
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| Strand | - |
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| Start bp | 323232 |
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| End bp | 324341 |
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| Gene Length | 1110 bp |
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| Protein Length | 369 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 643641418 |
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| Product | ABC transporter nucleotide binding/ATPase protein |
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| Protein accession | YP_002539715 |
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| Protein GI | 222102676 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3839] ABC-type sugar transport systems, ATPase components |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.88464 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCAAGCA TTTCGCTGAA AAAGCTCAAC AAATCCTTCG GTGCACTGAA AGTGGTGCAC
GATATCGACC TTGAGATCGC CGACAAGGAA TTCATCATTC TCGTCGGACC GTCCGGCTGC
GGCAAATCCA CCACGCTCAG AATGATTGCG GGGCTTGAGG AGATCTCCGG CGGGCAATTG
CTGATCGGCG AGGACCTGAT GAATGACGTG CCGTCAAAGG ACCGCGACAT TGCCATGGTT
TTCCAGAATT ATGCGCTCTA TCCGCATATG ACTGTCTACA AGAACATGGC GTTCGGACTT
GAGCTGCGGA AAGCGCCGCG CGATGTGATC GAGACAAAAG TCCAGGAAGC GGCAAAGATC
CTCGACATCA CCCATCTTCT GAACCGCAAG CCCAAGGCAC TGTCGGGAGG CCAGCGGCAG
CGCGTGGCGC TGGGCCGTGC GATGGTGCGC AATCCGGAAG TGTTTCTGCT CGACGAACCG
CTGTCCAACC TCGATGCCAA GCTACGCGGC ACGATGCGCG CCGAAATATC CAAGCTGCAT
AAGCGGCTGA ACGCCACCTT CATCTACGTG ACCCATGATC AGGTAGAGGC CATGACCATG
GCCGACCGTA TCGTTGTCAT GAAGGATGGC CACATCCAGC AGGTCGATAC GCCGCAGCGG
CTCTATGACC ATCCGATCAA CATGTTTGTG GCGGGCTTTA TCGGTGCGCC GCAGATGAAC
ATGCTGCCCT CGACGATCCG GCGCCAGGAG GATGGTTTCG TCGCCGTCTT CAACGATCAT
GCCCTACCCT TGCCGAACAC CTTCGACCAG AGCCGCATCG CGCCCTATCT GGACCGCGAC
ATCATTCTGG GCATACGGCC TGAAAACTTT CATGAACTGG CACCGGGCGA TATCGACCCT
GCCAATACGG CACCCTTTGA GGCGGTCGTT GAATTGGCCG AACCGATGGG CTCGGAAGTG
CATCTCAATC TCGTCGTTGC CGGACGCTCG GTCGTTGCCC GCGTGTCACC GCGCTTCAAG
GCCAGGCTTG GTGAGCAGGT GCGCCTCACC GCCGACATGA CCAATGCGCA ATTGTTCGAT
CCGCAAACCG AGCGGTCGAT CCTTTACTGA
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| Protein sequence | MASISLKKLN KSFGALKVVH DIDLEIADKE FIILVGPSGC GKSTTLRMIA GLEEISGGQL
LIGEDLMNDV PSKDRDIAMV FQNYALYPHM TVYKNMAFGL ELRKAPRDVI ETKVQEAAKI
LDITHLLNRK PKALSGGQRQ RVALGRAMVR NPEVFLLDEP LSNLDAKLRG TMRAEISKLH
KRLNATFIYV THDQVEAMTM ADRIVVMKDG HIQQVDTPQR LYDHPINMFV AGFIGAPQMN
MLPSTIRRQE DGFVAVFNDH ALPLPNTFDQ SRIAPYLDRD IILGIRPENF HELAPGDIDP
ANTAPFEAVV ELAEPMGSEV HLNLVVAGRS VVARVSPRFK ARLGEQVRLT ADMTNAQLFD
PQTERSILY
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