Gene Avi_7342 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvi_7342 
Symbol 
ID7380554 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAgrobacterium vitis S4 
KingdomBacteria 
Replicon accessionNC_011981 
Strand- 
Start bp322509 
End bp323219 
Gene Length711 bp 
Protein Length236 aa 
Translation table11 
GC content59% 
IMG OID643641417 
Producthypothetical protein 
Protein accessionYP_002539714 
Protein GI222102675 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAATGGT TGGAGGCCAT CTGGACGAAA GAAGGAAAGG GCATCGCCAA GGATGCGCCG 
AAGCGCACCG GTGTTGCACT GTTTTGCGAG ATCATCGGGC GCGAATGGTG GGAACTGGTC 
AAGCTCAACC TTCTGTTTCT GGTCGCCGCG TTGCCTGTCG TCACCCTGCC CGCAGCCCTC 
TTCGCCACCG CCAGTATGTG TCGCGCCATG GTGGAGGACC GCAACGTCTA CCTGCTGCGT 
GATTTTGCCG AAGCCTTTCG CCGCTATTTA GCCGTGGCAA CGGGATGGGG TCTGGCAACC 
GGTCTGGCGC TGTGGATCGG TTCTTGTGCG ATCTTAACCT ATGGCGCCCA AGTGCGCGAC 
AGCCTGATCT ACGCCGGCCC TCTGGCTGTC AGCCTTGTCG CAACCGGTTT TGTGGGCGTG 
TGGTCGGTGC ATTTCATTGT GCTTGCGGTG ATGAGCAAGC GTGGTGTCCT GGAGATCCTG 
CGGCTATCGG CGCTGGCAAC GCTTCTGCGG CCCTTGCCGA CGGTGGCAGC GCTGGTGTTT 
GTCGCGGCCC TCTGGCTTGT GCATGTGCTG CTCTATCCGG TTTCTGTCTT CATGCCGGCA 
ATGATCAATT TTTCACTTGG AATGTTCGCC GTTTCATTCG CCGCGCATCG GGCAGCCGCA 
CTGGTTTTGG CCGAGCCTGA TGCGGCGTAT CGGACAACCA AAATATCATA G
 
Protein sequence
MQWLEAIWTK EGKGIAKDAP KRTGVALFCE IIGREWWELV KLNLLFLVAA LPVVTLPAAL 
FATASMCRAM VEDRNVYLLR DFAEAFRRYL AVATGWGLAT GLALWIGSCA ILTYGAQVRD 
SLIYAGPLAV SLVATGFVGV WSVHFIVLAV MSKRGVLEIL RLSALATLLR PLPTVAALVF 
VAALWLVHVL LYPVSVFMPA MINFSLGMFA VSFAAHRAAA LVLAEPDAAY RTTKIS