| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_7337 |
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| Symbol | |
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| ID | 7380549 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011981 |
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| Strand | - |
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| Start bp | 314967 |
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| End bp | 316262 |
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| Gene Length | 1296 bp |
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| Protein Length | 431 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 643641412 |
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| Product | ABC transporter substrate binding protein |
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| Protein accession | YP_002539709 |
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| Protein GI | 222102670 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1653] ABC-type sugar transport system, periplasmic component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.00127436 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAAGA ACAGGCATGC GTTGACGCTT GTCGCGCTGT TGGTCGCCCC AGTGGGCGGG
AATGCCAATG AGATGATCAC CGGCGACACG GTTGGCCCGG CTGACGCGCC CAATAAAATG
ACATTCCGCA TGACGACCGA CGGTCCGCGC AACAATGACC CGGTTGTTGC TGAAGGCTAT
GGCAAGCTGT TCAATCAGTT TATTGCCAAG CATCCTGGCT GGCGCATTGA ATTGCAGATG
ATGACGGGGG ATATCAGTCA GGAGCAGGCC CGCATGGTTG AGCAGGCCAA GTCCGGCAAT
GCGCCCGATT GCGCTGCCGT GGACTCCTTC GTGCTGCCTG TTTTTAAAAA AGCCGGCGTG
CTGAAGTCCT TCTCGCCCTA TTTCACCAAG GAAGAGATCG ACCAGCTTTT CCCCTTCATT
CGCGAGGGCG TTACCGGCGC TGACGGCCAG ATTTATGCCT GGTGGTGGTC GACCGATCTG
CGTGTTCTCT ATCGCAACAA GGAGATCATT CCCGATGCGC CGCAGACATG GGACGAGACC
AAAAAGGCAG CACTTCACTC CGTGAAAGAG GGCATGGAAG GCATTCTGTT CAACGGCTCG
CGTTATGAAG GTACCACGTT TGACTGGCTG GCCAATTTCT GGGCGCAAGG CGGCAAGCTG
GTCGATGAGA GTGGCAAGCC GATCTTTGGC GAAGGCGCTG AGCGGGAAAA ATTCGTCAAG
GCGGTGAATT ACTATCGCGA TCTGGTGGAA TCAGGTGCGG CCCCGAAGCG CGTGGCCACC
ATTGGCAATT ATGATGATTT CAATGCCGCC GCAGCCGCTG GCACCACGGC GCTGTTTGTC
GGTGGCAATT GGCAATATGG CCAGCTGCAA GCCGCCCTTG AGCCGGAAGA ACTGGCAAAA
TGGACATTCT CACCCCTGCC CGGCCCCACC AAGGATCAGC GCTCGACCGG CACAGGTGGC
TGGACGGTTG CTTCTTTCGC GTCCGATCCG GCCAAGGTAA AAATGTGCGC TGATCTGGCT
CGTGATGTCT ATATGGGACC TGCCAACGAG GTTCAGGGGC AGCTGCCAAC CCGCGCCGAC
CTCTATGAAA AGTACAAGAT TTTCTCCTCT GACATCAACA AAGCTTTCTC GGAAGCCCTG
AAAGTCGGGC AAGCCCGGCC CGGTGCGCCG GTCTATCCCG AAATTTCCAA TCAGATCCAG
ATTATGATGG GCAAGGTGCT GACGGGAACG CAAGCCACGG ATGCGGCTGT CGATGAAGCC
TTCAAAGCTT CGCTTGCGGC ATTTGACCGC CACTGA
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| Protein sequence | MKKNRHALTL VALLVAPVGG NANEMITGDT VGPADAPNKM TFRMTTDGPR NNDPVVAEGY
GKLFNQFIAK HPGWRIELQM MTGDISQEQA RMVEQAKSGN APDCAAVDSF VLPVFKKAGV
LKSFSPYFTK EEIDQLFPFI REGVTGADGQ IYAWWWSTDL RVLYRNKEII PDAPQTWDET
KKAALHSVKE GMEGILFNGS RYEGTTFDWL ANFWAQGGKL VDESGKPIFG EGAEREKFVK
AVNYYRDLVE SGAAPKRVAT IGNYDDFNAA AAAGTTALFV GGNWQYGQLQ AALEPEELAK
WTFSPLPGPT KDQRSTGTGG WTVASFASDP AKVKMCADLA RDVYMGPANE VQGQLPTRAD
LYEKYKIFSS DINKAFSEAL KVGQARPGAP VYPEISNQIQ IMMGKVLTGT QATDAAVDEA
FKASLAAFDR H
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