| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_7334 |
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| Symbol | |
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| ID | 7380546 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011981 |
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| Strand | - |
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| Start bp | 310077 |
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| End bp | 313100 |
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| Gene Length | 3024 bp |
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| Protein Length | 1007 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 643641409 |
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| Product | alpha-D-mannosidase |
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| Protein accession | YP_002539706 |
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| Protein GI | 222102667 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0383] Alpha-mannosidase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCCTGA CCTATACCCA ACGCCTTGAA CGGATCGAAG TTCGCAACGC AGAATTCCAG
TTCTGGCGCG CCCGCAAAAC AGTTGAACTG ACCAGCTGGA ATTTCAATGG AGAACCCATT
GCCGTGGGCG AGGCCTGGCC GCACAAGACC CCGCCCATTG GCTTTACGGT AGATGTGACC
GTGCCGGAAG GCTGGCCGCT TGCGGATACC TATCTTTATC TCAACCTTGG CGGCGAAAGC
CTTCTAAGCA TCACAGCGCA AGATGGCACC ACCAAGCGTT ACGGGCTGGA CCCCTATCAC
CGCGAATTTG CAGCACCTTC GCAAAGCTTC TCGCTACACG CACAATCCGT TCCACGCCTG
CCTTTTGGTG AGCCGGTGCG CGCGCCGAAG CTTGAACGGG CCGAATTGTT CTGGATCGAC
CGTTCCGTGG ACCGCATGTG GCTGTTGATG CGCCAGATTG CCGAAGCATT AAGGGTGTTG
GAAGGCCATG ATGTGGTGCC CTATTTGCTG GATGCTGCCG AACAGGCGTT TTACGCCATC
GATTGGCCAT CGGCGACGGC AGACTATGTG GCGCGCACTG CCCCTGCGGT GATGCAGCAA
AAGATCTGGC AGCTGCCAGA TTTAAAGGCC GACCCTGAAG GTCTGACCGA CGCCCAGCGC
GCCAAACTGG ATCAAGCCTA TGAGGCGCTG ATGGCGCGCC TTGGCGAACT TCGTGAACGA
TTCCCCCCGC AGGGCAAGGT AGCACTAACC GGCCATGCCC ATATCGATCT GTGCTGGCTC
TGGCCCTATG ACGAGACGCG CCGCAAGATG CGCCGCACCT TCCACACGGC GCTGTCGATC
ATGGAAACAT CGAAGGATTT CCGCTTCAAC CAGTCAACCG CCCACTATTA CTGGCAGTTG
GAAGAGGATG ACCCTGAACT GCTCAACAAA ATCGTTGACC GTGCTAAAGA CGGCCAGTGG
GAAACACTCG GCGGCATGTG GATTGAGCCA GATACCAATA TGCCCACGGG TGAAAGCCTG
ACCCGACAAA TCCTCTACGG CCAGCGCTAT TTCGAAAAGC GTTTTGGCAC GCGCCACAGT
GTGTGCTGGC TGCCGGATTG CTTTGGCTTT GCCGGGGCCT TGCCGCAGCT TCTCAAACAG
GGTGGCATGA AAAGCTTCTT TACCATCAAG GTCAATTGGT CCGAAAGCAA CCATATCCCT
GCCGACCTGT TCTGGTGGGA AGGGTTGGAC GGCAGCCGTG TGCTGGCCCA CTCGTTCGAC
AATCCGATGG AGGGTTATAA CGGCTTTGTG CGGCCCGATT GCATTACGCC GACATGGAAA
AACTACCGCC AAAAAGATCG CCACGACACC ACACTGCTCT GCGTCGGCTA CGGCGACGGC
GGCGGTGGCC CAAGCCCTGA AATGGTGGTG CGCGAAGAAC AGCTGCGGGT TTTCCCCGCC
ATCCCGGAAG CCCGCTGGAC CCGCGTGCAT GACTTTTTTG AAGACGCCCA TGCAATGGCG
AAAACCACGC CCGTTTCTGT GTGGAAAGGC GAGATCTATC TGGAACTGCA CCGCGCCACG
CTGACCACGC AAAGCGCCAT CAAAAAACTG CACCGGAAGG CCGAGCGTAG CCTGATTACC
GCGGAAACGC TCGCATCCCT TGGCCATATT CTGGGAGCGG ACAAACCGCG TTCAATGGAG
CCGGAATGGC GGGTGGTGCT GAAAAACGAG TTCCACGACA TCCTTCCCGG CTCTTCGATT
GCCGAGGTTT ATGTGAATGC GAAAGTCGAG CTTGAACAGG TGCTGATGGA TGGCGCGGCG
GCGCAAAAAG CTGCCGTCGA TGCCATTCTT TCGCAATTGC CTGAGGGCAA TGAAGGTGCT
GTGCTGGTGA TCAACCCCAC GCTCAGCCCC CGGCCAATCC GCCTGACCCT GAAGGATGAG
AGCATCGCAA CTAATGGCGT GGTACCAGCC CTTGGTGTGA GCGTTTTGCC AGCCAGCGCC
CTGGACCCCA AACCGGGCTT GAAAGCCACG CAAAATACTC TGGAAAATGA CATCATCAAG
GTGACGCTGG CAGACGATGG CTCCATCGCC TCTATCCTGC ACAAAGCATC GGGCCGTGAA
GCGGTCGAGG GCGGTGCCAA CCGGCTGTTT GCCTATACAG CCGATAAGCC GCGCAATTGG
GATGCGTGGG ATGTAGAAGA GGATTACGGC CAAAAATCCG AGGAGTTGAG CGGACACGAG
TCCATCGAGC TTGTTGAAAA CACCGCCCAC CGCGCCGCCA TCCGCATCAA ACGCCGCTGG
CGCGATTCCA CCATTGTGCA AACATTGAGC CTTGCCGCCA ATGCCCGCCG CCTCGATATT
TTCACCGAGA TTGACTGGCA TGAGCGCCGC GTCATGTTGC GCACCGAAAA TGGTGTTGCC
GTCAGTGCGG CCCGTGCCAC CTGCGAGGTT GCTTATGGCG TGGTGGAGCG TCCAACCCAT
TCCAACACCT CGTGGGATGA GGCGATGTTT GAGGCACCGG CCCATCGGTT TATTGATCTG
TCCGAGCCGG GCTTTGGCAT GGCGCTGCTG AATGATGCCA AATATGGCCA CTCGGCCCGT
GGCAACGTGT TGGGCCTGTC CTTGCTGCGC TCACCCATCT ATCCTGATCC GCTGGCCGAT
GAAGGCTATC AATCCTTCAC CTATGCGCTG ATGCCCCATG AAGGCACATG GTATGAAGGT
CAGGTGCGCG AAGAAGCCGA TGATCTGAAC CAGCCTTTGA TAGCCATCCC GGTGTCAGGT
AAAGCAGCAG GTGAATGGTG CCCGTTGCAA GCAGCAGGGC TGGAGGTCGC TCTCTCGGCG
ATCAAGCCTG CCGAGGATGG CGATGGCTTG ATCGTGCGCG TATATGAGCC AGCCGGTCGA
CGGGGTGGCT TCCAGCTTAA GCCGTCAGAT GGCTGGACCG TCAGCGGCGC ACTCAGCATT
TTGGAAGAAC CAATGCAAGC GGTGGACGCG CAGGCGCTAA AACCCTTTGA GGTGAAGAGT
TGGCGTCTGT CGAAAACCGC GTGA
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| Protein sequence | MSLTYTQRLE RIEVRNAEFQ FWRARKTVEL TSWNFNGEPI AVGEAWPHKT PPIGFTVDVT
VPEGWPLADT YLYLNLGGES LLSITAQDGT TKRYGLDPYH REFAAPSQSF SLHAQSVPRL
PFGEPVRAPK LERAELFWID RSVDRMWLLM RQIAEALRVL EGHDVVPYLL DAAEQAFYAI
DWPSATADYV ARTAPAVMQQ KIWQLPDLKA DPEGLTDAQR AKLDQAYEAL MARLGELRER
FPPQGKVALT GHAHIDLCWL WPYDETRRKM RRTFHTALSI METSKDFRFN QSTAHYYWQL
EEDDPELLNK IVDRAKDGQW ETLGGMWIEP DTNMPTGESL TRQILYGQRY FEKRFGTRHS
VCWLPDCFGF AGALPQLLKQ GGMKSFFTIK VNWSESNHIP ADLFWWEGLD GSRVLAHSFD
NPMEGYNGFV RPDCITPTWK NYRQKDRHDT TLLCVGYGDG GGGPSPEMVV REEQLRVFPA
IPEARWTRVH DFFEDAHAMA KTTPVSVWKG EIYLELHRAT LTTQSAIKKL HRKAERSLIT
AETLASLGHI LGADKPRSME PEWRVVLKNE FHDILPGSSI AEVYVNAKVE LEQVLMDGAA
AQKAAVDAIL SQLPEGNEGA VLVINPTLSP RPIRLTLKDE SIATNGVVPA LGVSVLPASA
LDPKPGLKAT QNTLENDIIK VTLADDGSIA SILHKASGRE AVEGGANRLF AYTADKPRNW
DAWDVEEDYG QKSEELSGHE SIELVENTAH RAAIRIKRRW RDSTIVQTLS LAANARRLDI
FTEIDWHERR VMLRTENGVA VSAARATCEV AYGVVERPTH SNTSWDEAMF EAPAHRFIDL
SEPGFGMALL NDAKYGHSAR GNVLGLSLLR SPIYPDPLAD EGYQSFTYAL MPHEGTWYEG
QVREEADDLN QPLIAIPVSG KAAGEWCPLQ AAGLEVALSA IKPAEDGDGL IVRVYEPAGR
RGGFQLKPSD GWTVSGALSI LEEPMQAVDA QALKPFEVKS WRLSKTA
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