| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_7329 |
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| Symbol | |
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| ID | 7380542 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011981 |
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| Strand | - |
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| Start bp | 304403 |
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| End bp | 306283 |
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| Gene Length | 1881 bp |
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| Protein Length | 626 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 643641405 |
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| Product | ABC transporter nucleotide binding/ATPase protein |
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| Protein accession | YP_002539702 |
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| Protein GI | 222102663 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1123] ATPase components of various ABC-type transport systems, contain duplicated ATPase |
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| TIGRFAM ID | [TIGR02323] phosphonate C-P lyase system protein PhnK |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.148864 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCTCTT CTGCGACCCT GCCCCAAACC GCACCCTCTC TGCTAGACAA TCAGGTTCTG
GCGGTCGATG ACCTGACGGT ATCCTTTGCC ACATCCGAGG GCCGGGTGCA GGCCGTGCGC
AATATCAGCT TTGCGGTTGG CCGGGGTGAA ACGCTTGCGA TTGTGGGTGA ATCTGGCTCT
GGCAAATCCG TCACCTCGCT GGCGCTGATG CGGCTGATTG AGCATGGCGG TGGACGGATT
GATAGCGGTG CTATGCTGTT TCGCCCCAGC AATGACAAGG TGCTGGATCT GGCAAAGGCC
GATACGCCGA CCATGCGCAG TATTCGCGGT GCGGATATTG CCATGATCTT TCAAGAGCCG
ATGACATCGC TCAACCCGGT GTTTACCGCT GGCGAACAGA TTGCTGAATC CATCCGCCTG
CACCAGAAAA TGAACGAGGC CAGCGCCAAG GCGGAAGCGC TGCGCATGCT GGATCTGGTG
CGCATTCCAG AGGCCAAACA TGTGTTTGGC CGCTATCCGC ATCAACTGTC CGGCGGCATG
CGCCAGCGGG TGATGATTGC CATGGCGCTG GCCTGCCGCC CTTCCTTGCT GATTGCCGAT
GAACCCACAA CGGCGCTGGA TGTCACCGTG CAGGCGCAAA TTTTGCAGCT GATCCGCCAG
CTTCAGGACG ACATGAACAT GGGCGTGTTG TTCATCACCC ATGATATGGG CGTGGTGGCC
GAAATTGCCG ACCGCGTATT GGTGATGCGC CAAGGTGAAA AGGTCGAGCA TGGCGCATCG
AAAGACGTGT TCGAGCGCCC GAACCATCCC TATACCCAAG CCCTTCTGGC CGCTGTGCCG
CGCCTTGGGG CCATGGCCGG GACCGATGGT CCGCGCGCTT TTGATCTGGT GGGGGCCGAT
AGCACCCAGA CCCATGCAGA ACAACCTCCA GCACGGTTTG ATCTGCCGCC GATTTTGAAA
GTGCGCGATC TGGTCACCCG CTTTGATGTT CGGCGCGGCC TGTTCAACCG GGTTGATCGG
TCAGTTCATG CGGTGGAAAA GGTCAGCTTT GATCTGCATG CTGGCGAAAC CTTGGCATTG
GTGGGCGAAT CCGGTTGTGG CAAATCCACC ACGGGCCGTT CACTCTTGCG TCTGGTCAAT
AGCCAGAGCG GCAGCGTGGA ATTTGATGGC CGCAATGTTC TTGATCTTCC GGCCAGCGAG
TTGCGTGGCC TTCGCCGCAG CATTCAGCTG GTGTTTCAAG ACCCCTTCGC CTCGCTGGAT
CCAAGGCTGA CGGTTGGTTT TTCCATTATG GAGCCTCTGC TGATCCATGG CATTGCCAAA
GGCGAAGAAG CGAGACAGCG CGTGGCTTGG CTTTTGGAGC GGGTGGGCCT GTCGGCTGCC
CATTCTGAGC GCTATCCGCA TGAATTCTCC GGTGGCCAGC GTCAGCGCAT TGCCATTGCA
CGTGCCTTGG CGCTGAACCC GAAAGTGGTG GTGGCCGATG AATCGGTCTC GGCGCTGGAT
GTGTCGATTC AGGCGCAGAT CGTCAATCTT CTTTTGGAAT TGCAGCGTGA TCTGGGCATT
TCCTATCTGT TTATTTCCCA CGACATGGCC GTGGTGGAGC GCGTCAGCCA CCGGGTGGCG
GTGATGTATC TGGGGCAGAT TGTTGAAATT GGCCCACGCC GGGCCATTTT TGAAAACCCG
CAGCACCCCT ATACCAAAAA GCTGATGGCA GCCGTGCCGA TTGCCGACCC GGCCCGCCGC
CATTTGAAAC GGCAATTTGC TGTTGAAGAC CTGCCAAGCC CGATGCGCAA AAAGGGCGAT
GAGCCAGTGG TAGAAGCCTT GCACGAGGTG TCACCCGGCC ATTTCGTGGC CCGGCACAGC
GTTGGCGCGT TTAAAATGTA A
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| Protein sequence | MTSSATLPQT APSLLDNQVL AVDDLTVSFA TSEGRVQAVR NISFAVGRGE TLAIVGESGS
GKSVTSLALM RLIEHGGGRI DSGAMLFRPS NDKVLDLAKA DTPTMRSIRG ADIAMIFQEP
MTSLNPVFTA GEQIAESIRL HQKMNEASAK AEALRMLDLV RIPEAKHVFG RYPHQLSGGM
RQRVMIAMAL ACRPSLLIAD EPTTALDVTV QAQILQLIRQ LQDDMNMGVL FITHDMGVVA
EIADRVLVMR QGEKVEHGAS KDVFERPNHP YTQALLAAVP RLGAMAGTDG PRAFDLVGAD
STQTHAEQPP ARFDLPPILK VRDLVTRFDV RRGLFNRVDR SVHAVEKVSF DLHAGETLAL
VGESGCGKST TGRSLLRLVN SQSGSVEFDG RNVLDLPASE LRGLRRSIQL VFQDPFASLD
PRLTVGFSIM EPLLIHGIAK GEEARQRVAW LLERVGLSAA HSERYPHEFS GGQRQRIAIA
RALALNPKVV VADESVSALD VSIQAQIVNL LLELQRDLGI SYLFISHDMA VVERVSHRVA
VMYLGQIVEI GPRRAIFENP QHPYTKKLMA AVPIADPARR HLKRQFAVED LPSPMRKKGD
EPVVEALHEV SPGHFVARHS VGAFKM
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