| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_7328 |
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| Symbol | dppA |
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| ID | 7380541 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011981 |
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| Strand | - |
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| Start bp | 302806 |
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| End bp | 304359 |
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| Gene Length | 1554 bp |
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| Protein Length | 517 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 643641404 |
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| Product | ABC transporter substrate binding protein (dipeptide) |
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| Protein accession | YP_002539701 |
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| Protein GI | 222102662 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.399444 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGCATA GATTTTCTTC CCGGCTCGCA TCTGCCACGG TCTTGGCAGG CATTCTCAGT
ATGGGTGCGG GACAGGCACT TGCCGCTGGC AGCGTGGTTC TGGCCCTCAA CACACAGGCT
GAAACGCTGG ACCCATATAA CACCAACACC ACGCTGACCA CCGCTGTGAC AAAGTCCTTC
TACGAAGGCC TGTTTGGCTT CGATAAGGAT TTGAAGGTTC AGCCGGTTCT GGCAACGGGC
TACACCGTCT CCGATGATGG TCTGGTCTAC ACCATCAAGC TGCGTGACGG CGTGAAGTTT
CAAGACGGCA CCGATTTCAA TGCGGATGCC GTGAAGGTCA ATTTTGACCG CGTGCGCAAC
CCGGACAACA AGCTGTCTCG CTTCAACCAG TTCAACCAGA TCGACAAGGT TGAGGTTGTC
TCACCGCTTG AAGTGCGTAT CACGCTAAAG CAGCCCTTCG GCCCGTTCAT CAACTCGCTG
GCCCATGCCT CTGCTGCAAT GATTTCGCCA GCAGCGCTGA CAAAATGGGG CAACAAGGAA
ATCGCCTTCC ATCCGGTTGG TACCGGCCCG TTTGAGTTTG TCGAATGGAA GCAGACCGAT
TACGTCAAGG CCAAGAAGTT TGATGGCTAC TGGCGTAAGG GCTTCCCAAA GGTGGATGAA
ATCACCTGGA AGCCAGTGCC AGATAACAAC ACCCGCGCTG CCATGTTGCA GACCGGGGAA
GCTGATTTCG CCTACCCCAT GCCCTATGAG CAGGTGGCAA CGCTGAAGCA GAACACCAAG
CTGACGGTGA CGGTTTCGCC GTCGATCATT GAGCGCTATG TCAGCTTCAA CATGCTGCAA
AAGCCGTTTG ATGATCTGCG CGTGCGTCAG GCCATCAACT ATGCCATCAA CAAAGAAGCC
CTTGCCAAGG TGGCCTTCAG CGGCTTTGCC AAGCCCGCCG AAGGCGTTGT GCCAGAAGGC
GTGCTTTACG CCCACAAAAT TGCGCCATGG CCTTATGATC CGGCCAGGGC ACGCGCTTTG
CTGAAAGAAG CGGGCTATCC CAACGGCTTT GAATCCACCC TATGGAGCGC TTACACCACC
ACCACGGCGC AAAAGGCCAT TCAGTTCTTG CAGCAGCAAT TGCAGCAGGT TGGCATCAAG
GTGACGCTTC AGGCGCTTGA GCCGGGCCAG CGAGTAGAAT GGGTGCAGAC AGCGCCCGAT
CCGAAAACCG CCAAAGTGCG GATGTATTAT GCTGGATGGT CGTCCTCAAC CGGTGAAGCC
GACTGGGCGC TGCGTCCGCT GCTGGCCACC GAAGCATGGC CGCCAAAGCT GAGCAACACG
GCCTATTACA GCAATCCCAT TGTGGACGAT CTGATTGCCA AGGCCATGAA GACCACCAAG
GAAGACGAAA AGAAGACCTT CTATGCCGAT GCACAGGAAC AGATCATGAA GGATCTGCCT
TGGGCTCCGC TGGTGACCGA AAACAACGTT TCGGCTGCCG CAACAAAGCT TGAGGGCGTT
TATGTCATGC CGGATGGCAA TATCGACAGC TCGGACATTG CACTCAAGCA ATAA
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| Protein sequence | MKHRFSSRLA SATVLAGILS MGAGQALAAG SVVLALNTQA ETLDPYNTNT TLTTAVTKSF
YEGLFGFDKD LKVQPVLATG YTVSDDGLVY TIKLRDGVKF QDGTDFNADA VKVNFDRVRN
PDNKLSRFNQ FNQIDKVEVV SPLEVRITLK QPFGPFINSL AHASAAMISP AALTKWGNKE
IAFHPVGTGP FEFVEWKQTD YVKAKKFDGY WRKGFPKVDE ITWKPVPDNN TRAAMLQTGE
ADFAYPMPYE QVATLKQNTK LTVTVSPSII ERYVSFNMLQ KPFDDLRVRQ AINYAINKEA
LAKVAFSGFA KPAEGVVPEG VLYAHKIAPW PYDPARARAL LKEAGYPNGF ESTLWSAYTT
TTAQKAIQFL QQQLQQVGIK VTLQALEPGQ RVEWVQTAPD PKTAKVRMYY AGWSSSTGEA
DWALRPLLAT EAWPPKLSNT AYYSNPIVDD LIAKAMKTTK EDEKKTFYAD AQEQIMKDLP
WAPLVTENNV SAAATKLEGV YVMPDGNIDS SDIALKQ
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