| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_7327 |
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| Symbol | dppB |
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| ID | 7380540 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011981 |
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| Strand | - |
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| Start bp | 301750 |
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| End bp | 302670 |
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| Gene Length | 921 bp |
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| Protein Length | 306 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 643641403 |
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| Product | ABC transporter membrane spanning protein (dipeptide) |
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| Protein accession | YP_002539700 |
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| Protein GI | 222102661 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG0601] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTCAATT ATTTTCTCAA GCGCCTGTTC GGGCTGCTGC CCACACTTCT GATCGTTGCC
GTTCTGGTGT TTCTGTTTGT GCATATGCTG CCGGGTGATC CGGCGCGCCT TGCGGCAGGG
CAGGATGCGG ACGAGCAGAC CGTGGCGCTG GTGCGCAGCG AACTGGGCCT CGACAAGCCC
CTACCCCAGC AATTTGTCGA GTATTTCACA CGAATGTTGC ATGGCGACCT TGGGGTGTCG
ATCCGCACCC ATCGCCCGGT GTCTGTTGAA ATTGGCGAGC GCTTCATGCC CACCATGCTG
CTGACGCTGA CCAGCATGAT CTGGTCGGTG TCCGTTGGCA TGATCATTGG CGTCTTTTCT
GCCGTGTTTC GCAACCGCTG GCCGGATAGA TTGGGCATGA CCGTGGCCGT GTCTGGCATT
TCCTTTCCGG CCTTTGCGCT GGGCATGTTG CTGATGCAGA TTTTCTCGGT CTGGCTCGGA
TGGCTGCCCA CCGTGGGGGC CGATAGCTGG CGGCATTACA TCCTGCCATC GATAACGCTG
GGCGCAGGCG TTGCCGCTGT CATGGCCCGC TTTACCCGAG CCGCCTTTGT AGATGTGATT
CAGGAAGATT TTGTGCGCAC CGCCCGCGCC AAGGGGCTGA ATGAAAAAGT GGTGATTGCC
AAACATTGCC TGCGCAACGC GCTGATCCCG ATTGTCACCA TGATGGGCCT GCAATTCGGC
TTTCTGCTGG GCGGCTCCAT TGTGGTGGAG GCGGTGTTCA ACTGGCCGGG TGTTGGCCGT
TTGCTGGTCG ATGCGGTGAA CCAGCGGGAT TATCCGGTAA TTCAGGCCCT CGTGCTGATG
TTCTCGCTGG AATTCATCCT GATCAATCTT GTCGTGGATC TGCTCTACGG CGTCATCAAT
CCGACAATCC GTTATAAATG A
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| Protein sequence | MFNYFLKRLF GLLPTLLIVA VLVFLFVHML PGDPARLAAG QDADEQTVAL VRSELGLDKP
LPQQFVEYFT RMLHGDLGVS IRTHRPVSVE IGERFMPTML LTLTSMIWSV SVGMIIGVFS
AVFRNRWPDR LGMTVAVSGI SFPAFALGML LMQIFSVWLG WLPTVGADSW RHYILPSITL
GAGVAAVMAR FTRAAFVDVI QEDFVRTARA KGLNEKVVIA KHCLRNALIP IVTMMGLQFG
FLLGGSIVVE AVFNWPGVGR LLVDAVNQRD YPVIQALVLM FSLEFILINL VVDLLYGVIN
PTIRYK
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