| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_7312 |
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| Symbol | |
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| ID | 7380531 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011981 |
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| Strand | + |
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| Start bp | 290930 |
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| End bp | 292306 |
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| Gene Length | 1377 bp |
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| Protein Length | 458 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 643641395 |
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| Product | hypothetical protein |
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| Protein accession | YP_002539692 |
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| Protein GI | 222102653 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0534] Na+-driven multidrug efflux pump |
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| TIGRFAM ID | [TIGR00797] putative efflux protein, MATE family |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAGACAG TTGAAACCCT TGGCGATGCG GCCCCGCCGC GCCGCCCGCC ATCGGCGCGA
ACGACAAAGT CGCTTTTCCG GCTTAGCCTG CCGATGTTCG TGCATTCGCT GCTGACCTTT
CTGGTCATGC TGTCGGAAAT GCTGATCATG AGCGCTTATT CCGCCAATGC GGCAGCAGCC
GTGGCGATTG TGCGGCAGGT GCTCCAAGTC GTCTTCGAGA TTTCGAGCAT GGTCGGGATC
GGCGCTGTCA TCCTGATATC GCACAGTCTC GGGCGTGGTG ACGAGGAGGG TGCGCGGCAG
ATCGCAACGC TTGCGGTCTT CACCAATACG CTCCTTGGCC TTTTGGTAGG CGGTCTGCTG
TTTCTGGGTG GACCGGTGGC CTTGCGGATT CTCGATGTCC CGGCATCAAT CGTTCACGAT
GCAAGCCTTT ATCTTGTCCT CGCTGCCGCC GCCATGGTCT TCAATGCGCT TGCCACGGCT
GCGATTGCCT GCCTGAGGGC TTTCGGCAGC AGCCGGGTGA TCGTGATGAC CGGCTTGTTT
CTGTCGGTGA TTTACATTGG GGCGACCTAT GTTCTTGTGC TTGGTGCCGG ACCAATCCCC
CCGCTTGGGG TGACAGGTGC GGCCTATGCA ACACTCGGCT CAAGGATTGC AATGGCGCTG
ATGTTCGGCC TTGCCGTCTA TTGCGCCCTT GGTCTTCGTT TCGCCTCTGG GCCGATCAGG
GCGCGGCTTT CGCTCGTGCG GCGCATGCTT GTCCTCGCCT TTCCGAGTGT TTCGGACTAT
ATCGGCTACG GTTTTTACCA GCTTGTGCTG CTCGGCTTTG TGGCGGGCTT CGGCGTTTCA
AGTGTCTTGA GCCGTACCTA TGTCATGCTG GCCATGACGT TCCTCATCCT TGTCGTTATG
GCTGTGAGCC AAGGAAACGA GGTGCTCGTC GGCTATCGCT GGGGCGAAGG TCGGCGGCAG
GACGCCTATC GTCAGGCGTT GCGCTCCAGC TTTGCGGCGA CCTTGGTCAC GACGACAATC
GCGCTGCTGT TCTGGCTCAT GTCCGATCAA TATCTCGGAT TGTTCGGGCA GGGCGGTGAG
GTTCTGGCGC TTTCCACCTA CCTGCTGCTG CTGACGATCT TCATCCAGCC CGGCTTCGCC
TTCAATACAG TGTTGCTGCA TTCGCTCAGG GCTGTCGGCG ATGTCAGGAT TCCGGTCCTC
GTCAGTATCG GCTTGACCTG GGGGCTCGGC CTGCCGCTGG CCTGGCTGTT TTGCGTGCAG
GCGGACTATG GGGTGGAAGG TGTCTGGTAC GCGCTGATCA TCGAAGAGAC ACTCAAGGCC
GGTTTCATGC TTTCGCGCTG GCACGGGCGG GGATGGATGG GCAATGCCAT TGCCTGA
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| Protein sequence | MQTVETLGDA APPRRPPSAR TTKSLFRLSL PMFVHSLLTF LVMLSEMLIM SAYSANAAAA
VAIVRQVLQV VFEISSMVGI GAVILISHSL GRGDEEGARQ IATLAVFTNT LLGLLVGGLL
FLGGPVALRI LDVPASIVHD ASLYLVLAAA AMVFNALATA AIACLRAFGS SRVIVMTGLF
LSVIYIGATY VLVLGAGPIP PLGVTGAAYA TLGSRIAMAL MFGLAVYCAL GLRFASGPIR
ARLSLVRRML VLAFPSVSDY IGYGFYQLVL LGFVAGFGVS SVLSRTYVML AMTFLILVVM
AVSQGNEVLV GYRWGEGRRQ DAYRQALRSS FAATLVTTTI ALLFWLMSDQ YLGLFGQGGE
VLALSTYLLL LTIFIQPGFA FNTVLLHSLR AVGDVRIPVL VSIGLTWGLG LPLAWLFCVQ
ADYGVEGVWY ALIIEETLKA GFMLSRWHGR GWMGNAIA
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