| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_7306 |
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| Symbol | |
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| ID | 7380526 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011981 |
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| Strand | - |
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| Start bp | 271520 |
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| End bp | 276040 |
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| Gene Length | 4521 bp |
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| Protein Length | 1506 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 643641390 |
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| Product | peptide synthetase |
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| Protein accession | YP_002539687 |
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| Protein GI | 222102648 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG1020] Non-ribosomal peptide synthetase modules and related proteins
[COG3320] Putative dehydrogenase domain of multifunctional non-ribosomal peptide synthetases and related enzymes |
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| TIGRFAM ID | [TIGR01733] amino acid adenylation domain
[TIGR01746] thioester reductase domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.370247 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCGCTC CCGAAACGGT GGAAGCGCTG CTGTCGCGCC TGTCGGAAAA AGGCATCCGC
ATCACATGCG TCGATGGGCG GCTGCGACTT TCCGGCTGCG AGAGCGTGCT CACGCAGGAC
ATCACCGACG CGATCCGCGC CCGCAAGGCG GAGATCATTG CGAATCTTTC CCTGGACGTC
GCTTATCAAG ACGCGACACA TAGCGAGACA ATCCCGGCCC GTCATGCGGA CAGGCCGCCG
CTTTCCTTTG CCCAGCAGCG CTTGTGGTTT GTGGAACAGA TGATGCCGGA GGCTGGCCTT
CACCACATAT CGCTGGCTGT TGAGGCCCAC GGCAGCATCG ATCTTTCCGC ATTGCAGGCA
GCGCTTCAGG CCGTCGCAGA GCGCCACGCC ATCCTGCGCA CCCGCATCAA TATGCGGGAT
GGCATGCCCT CTCAACGCAT CATCGCCGAC AGTGATATTC CGCTGCAATT GATCGACCGA
CAGGGTGATA TGCCGGATGA GGCGGAAATC GACCGGATAC GGCAAGAGGA AGCGCGGCGG
CCATTTGATC TGGCCTTTGA GTCGCCCCTC CGTCTCACGG CAATCCGCCT TGGCCCCGAG
CGAACCCTTT TGCTGCTGAC GCTGCACCAC ATTGCCGGGG ACGGTTGGTC GATGGATGTG
CTGCTTGGCG ATCTCTCCGC GATCTATCAG GCCAAGGTGT CGGGCGTTGA GCTTGATCTG
CCAGCGCTTC CCATCCAATA CGGCGACTTC GCCGCATGGC AGCGCGACCA TCTGGCAGGC
CCGGCGCTTG AGCGGTCTTT AGCGTTCTGG ACAGATCATC TGGAAGCTCC GCTTCCCGCC
ACGCAATTGC CGGGGGATTT CACCCGGCCA CCTGTTCAGG CCAATGCCGG AGCCTTGCAT
TCCATCGCCT TCGATGCGGC CACGACGGCC CGGCTGAAAG CGCTTGCGAA AGCAGAAGGT
GCCACCCTGT TCGCCACGCT GTTTACGGCC TTCAACACCC TCGTCTATCG CTATACCGGG
CAAAGGGATC TGGTGATTGG CACGCCCGTC GCCAACCGTC GTCACCGGGA AACGGAAGGG
TTGATCGGCC TCTTCGTCAA TCCGCTGCCG GTGCGCACAA GGCTTCATCC CGCAGCGAGC
TTTCGCGAGA CGCTGCGCCA AAGCCAAGCG ACCCTCTGGT CGGTGCTTGA CCACCAAGAC
CTGCCTTTTG AGCAATTGGT GGAAGCACTG AAGCCGGAGC GCGATCCGAG CGTCCATCCG
CTTTTCCAAT TGAAGTTCCA GCTCGATGCT CAGCCTTCGC AAAGGGTCGG ACTTTCGGGC
CTCGCGCTGA CCCGCCTGCC ACGACACGAT GGTGTTGCGA AACTCGATCT CAGCCTTAAC
CTGATCGATG CCGGAAACAC GATCCATGGC ACTTTCGAAT ATGACACAGC GCTTTTCCGC
TCTGAGACAA TCGCCTCCCT CGCCGCCCAT TTCGGTGTGC TGATCGAAGC AATTGCCATT
GAGCCGGACA CGGCCCTTGC CATTCTTCCC TTGCTCGGAA CCGAGGAGCG TCAGCGCCAG
ATCGTCGGCT GGAATGCAAC GGCGAAACCT TTTGATGAGA AGGCCTTTTT CCACACGGTG
TTCGAGGCCC ACGCCGCCCG CAAACCAGAC GCGATTGCGC TTGTTCATGT CAGTGATGGC
AAGCGACGCA CCCTGACCTA TGACGCCCTC AACCGACGCG CCAACCAGAT CGCGCACCAC
CTGCGCGGTC TGGGTGCGGG TCCAGAGACC ATCGTTGCCA TCGCGCTTGA GCGCGGTTTC
GATATGATTG CCGCTTGGCT CGGCGTGCTC AAGTCTGGCG CTGCCTATCT GCCGCTGGAT
CCGGCCTATC CGCCGGAACG CCTCGCCATG ATGCTCTCAG ATTCGCAAGC CCGCTTGGTT
TTGACCGAAA GCCGCCGGAC ATTGCCGGAG ACGGTAACCC GCATTGATCT CGATACCGAT
TGGCCACGGG ATGCGGCGAC GGGCAATCCT GATCTCGTCA ATCGGCCCGA TCACCTTGCC
TATATCATCT ACACCTCAGG ATCGACCGGG CGGCCAAAAG GCGTGCTCGT CGAGCACAGG
GGCCTCGTCA ACCTGACGCA ACACAAGATC CGTATTGGCG GGGTGAAGCC GGGCGATTGT
GTGCTCCAGT TCTTCTCCTT CTCGTTTGAT GCCTCGATTC CAGAACTCGT CATGGCGCTT
GGCGCAGGCG CGTCATTGCT GCTGCTGCCC GCCAGCGACC TTCTGCCCGG ACCAGCGCTT
GCCGAACACA TGAAAACGCA AGCCGTAACA CATGTGACAA TGACACCCTC CGCGCTCATC
GCGCTGCCAT CGGGCGATTA TCCAGCACTG CGCATGGTGC TAACCGGCGG CGAAGCCCCG
ACGCCCGAAT TGATCGAACG TTGGGGAACG GGGCGGCTGT TCATCAACGC CTATGGCCCG
ACGGAAACAA CGGTCAATGC GAGCATGGTC CCCTGCGGCA ACGGTCATCC CATTGAGGCA
ACCTTGCTGC CCGCTGCCAA CAAGCAACTC TATGTGCTCG ACGCCAATCT GGAGCCGGTT
CCGGTCGGTC AACCGGGCGA ACTGCATATC GGCGGGCTTG GCATTGCCCG GGGCTATCAC
GGTCGCCCGG CACTGACAGC CGAGCGCTTC GTGCCCGATC CATTTTCCGC GACGGGCGGC
GTGCTCTATC GAACAGGCGA CCGTGCCTGC CAACGGGCGG ATGGCCGCAT CCGGGTGCTT
GGCCGCCTCG ACGATCAGGT GAAAATCCGT GGCTATCGCA TCGAGCCGGG TGAAATCGAG
GCCATGGTGC TGACGCATCC CACCATAGTG GCTGCGGCAG TCGTGATCCA CGAGATTGAT
GGTGAAAAGC GCGTCATTGC CTACGGCGTC GCCAAGGAGG CAACCACCAT CAGCGCCGTG
GACATGAAGG CATTCCTCGC CGCACATCTG CCCCGCTACC TCGTGCCGGA CGCCTTCGTC
TGGCTTGATC GCTTGCCACT CACCGTCAAT GGAAAGATCG ACACAAAAGC ACTTCCGCTT
CTGGATCTGA CACCACAGGC TGGCCGTCCG CCGCAAGGAG AGACGGAAAA CGCAATCGCG
GCAATTTTCG CGCAAGTGCT CGGATGCCCG CCTGTCTCGG CCACTGATGA TTTCTTCGTA
ATCGGCGGTC ACTCGCTGCT GGCCACGCGG CTATCGGCCC TTGCCAAATC GGCGTTCGGC
CTCGACATCG CCATTATCGA TCTCTTCGAG GCCCCGACGG TCGAAGCACT GGCGGCAAGG
ATAAGCAACC GAAACCACAG CCTGATGACG GAAGAGGAGA TGTGCCGGGC CGATACCGAG
CTTGATGCGG CCATCCGCAT TCCGGCACAG ATTGTGTCTA CTCATCCTTT GAGCCATGTG
TTTCTCACTG GAGCGACAGG CTTTCTGGGC GCTTACCTGC TCAGCGAACT GCTCAAGGAC
AAGTCTCGCA CGGTCTCCTG CCTCGTCCGG GGCGTGACCG GGGCGGATCG CCTGCGCCAA
TCGCTTCAAT CCTACGGTCT GTGGCGGGAT GACCTTGCTG AACGCATCAG GCCGCTGCCG
GGCGATCTCT CACAGCAAAA ATTCGGGCTT TCCGATGCCG TCTACACGGC ACTTGGTGAA
AGCATAGACG CCATCATCCA CAATGGCGCG GAGGTTCATC ATCTGCATCC CTATCAACGC
CTTCGCGCTC CCAATGTCGG CGGCACGGTC GAGGCGATCC GGCTGGCGGC GGTGGGCCGA
GGACGGCCCT TGCATCTTAT TTCCTCGCTC AGCGCCCTGA CACGCCGAGG AGCCGGGGAA
ACGATAGGCG AAAGCGCCGT GATCGGGGAC TTCCCCTTGC CTGCTGGCGG ATACAACCAG
ACCAAGTGGG TTGCGGAGCA TCTTGCGCAA GCCGCCAAAG AGCGTGGTCT CCCGGTGACA
ATCTACCGCC CCGGCGCGAT TTCGGGCGAT AGCCGCACCG GCACTTTCAA CAAAGCCGAC
ATCCTGTGCC GGCTCATGCA GGGCTATCTG CGCTCAGGGC TTGCGCCAGA GGGTGACACC
CCGCTGGAAA TGCTGCCGGT GGACACGGTC GCGCACGCGA TCATTGCCCT TGCGGACGAA
CCCTCATCGA TTGGCCAAAC CTTCCATCTG GTCCATTCGT CGCCCGTCTC CTCCGCGCTG
CTGTTTGAGG CGGCAGCGGC CGAAGGGCTC CATTTGCAAC GCATTCCCCG GCTGGAATGG
CGTGCCGAGC TTGATCGCAT TGCGCGGGAA GAGACCGATC ATCCGCTTTA CCCGCTGATG
GGTCTTTTCG AACAAAAGCC AGCCAGTTCA TCGCAGGGCA CAATCCGCAC CGTTGAGCGC
CGTGAAACGC ATCGCGCGCT GGCGCTCGCA TCGATTGTCG AGCCAGCGCT CGACCTTCGC
CTTTTTCGCT CCTATCTGCG CGCCTTCATT CTCTCTGGCG CGCTCAACCC TTCCAAAGAA
AATGAGCAGA GATATGCTTG A
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| Protein sequence | MTAPETVEAL LSRLSEKGIR ITCVDGRLRL SGCESVLTQD ITDAIRARKA EIIANLSLDV
AYQDATHSET IPARHADRPP LSFAQQRLWF VEQMMPEAGL HHISLAVEAH GSIDLSALQA
ALQAVAERHA ILRTRINMRD GMPSQRIIAD SDIPLQLIDR QGDMPDEAEI DRIRQEEARR
PFDLAFESPL RLTAIRLGPE RTLLLLTLHH IAGDGWSMDV LLGDLSAIYQ AKVSGVELDL
PALPIQYGDF AAWQRDHLAG PALERSLAFW TDHLEAPLPA TQLPGDFTRP PVQANAGALH
SIAFDAATTA RLKALAKAEG ATLFATLFTA FNTLVYRYTG QRDLVIGTPV ANRRHRETEG
LIGLFVNPLP VRTRLHPAAS FRETLRQSQA TLWSVLDHQD LPFEQLVEAL KPERDPSVHP
LFQLKFQLDA QPSQRVGLSG LALTRLPRHD GVAKLDLSLN LIDAGNTIHG TFEYDTALFR
SETIASLAAH FGVLIEAIAI EPDTALAILP LLGTEERQRQ IVGWNATAKP FDEKAFFHTV
FEAHAARKPD AIALVHVSDG KRRTLTYDAL NRRANQIAHH LRGLGAGPET IVAIALERGF
DMIAAWLGVL KSGAAYLPLD PAYPPERLAM MLSDSQARLV LTESRRTLPE TVTRIDLDTD
WPRDAATGNP DLVNRPDHLA YIIYTSGSTG RPKGVLVEHR GLVNLTQHKI RIGGVKPGDC
VLQFFSFSFD ASIPELVMAL GAGASLLLLP ASDLLPGPAL AEHMKTQAVT HVTMTPSALI
ALPSGDYPAL RMVLTGGEAP TPELIERWGT GRLFINAYGP TETTVNASMV PCGNGHPIEA
TLLPAANKQL YVLDANLEPV PVGQPGELHI GGLGIARGYH GRPALTAERF VPDPFSATGG
VLYRTGDRAC QRADGRIRVL GRLDDQVKIR GYRIEPGEIE AMVLTHPTIV AAAVVIHEID
GEKRVIAYGV AKEATTISAV DMKAFLAAHL PRYLVPDAFV WLDRLPLTVN GKIDTKALPL
LDLTPQAGRP PQGETENAIA AIFAQVLGCP PVSATDDFFV IGGHSLLATR LSALAKSAFG
LDIAIIDLFE APTVEALAAR ISNRNHSLMT EEEMCRADTE LDAAIRIPAQ IVSTHPLSHV
FLTGATGFLG AYLLSELLKD KSRTVSCLVR GVTGADRLRQ SLQSYGLWRD DLAERIRPLP
GDLSQQKFGL SDAVYTALGE SIDAIIHNGA EVHHLHPYQR LRAPNVGGTV EAIRLAAVGR
GRPLHLISSL SALTRRGAGE TIGESAVIGD FPLPAGGYNQ TKWVAEHLAQ AAKERGLPVT
IYRPGAISGD SRTGTFNKAD ILCRLMQGYL RSGLAPEGDT PLEMLPVDTV AHAIIALADE
PSSIGQTFHL VHSSPVSSAL LFEAAAAEGL HLQRIPRLEW RAELDRIARE ETDHPLYPLM
GLFEQKPASS SQGTIRTVER RETHRALALA SIVEPALDLR LFRSYLRAFI LSGALNPSKE
NEQRYA
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