| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_7280 |
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| Symbol | |
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| ID | 7380506 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011981 |
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| Strand | + |
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| Start bp | 238155 |
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| End bp | 238655 |
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| Gene Length | 501 bp |
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| Protein Length | 166 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 643641370 |
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| Product | Electron transport protein SCO1/SenC |
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| Protein accession | YP_002539667 |
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| Protein GI | 222102628 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1999] Uncharacterized protein SCO1/SenC/PrrC, involved in biogenesis of respiratory and photosynthetic systems |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.905636 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTTGAGG GAAGCTTCTC GCTCACCGAT CATAATGGAC ATGCTGTCAC CGAGGCGAGT
TATCGCGGCA GCTTCATGCT GGTCTATTTC GGCTTTACCC ATTGCCGCAA AGTCTGCCCG
CGCTCGCTTG CCTGCATGAC TGCGGCGCTG GACACATTGG GCGAGACCCG ACGTATGGTC
GTGCCGCTTT ACATCACCGT CGATCCGGAG CGCGATACAC CGGAGAGAAT GAAAGCCTTT
GTTGAAGCAA ACTTTCCGCG TTTCACTGGC CTGACGGGAA GCCGCGAGGC GATCGACAGC
GCGAAGGCAT CCTTCCGCGT CTTTTCCCGC AAGGGGCTCG ATCCGGAAGA TGCAGAAGGC
TATGCCATGC CACACACGGC CTTCGCCTAT CTGCTCGGGC CTGACGGCAA ATATCTGGCA
CATTTCATGG ACACCATTGA TGATCTGCAA ATGGCGAACC GTCTCCGCAT TCTTCTCGCT
GAAACCGAAC GGGTCACCTG A
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| Protein sequence | MLEGSFSLTD HNGHAVTEAS YRGSFMLVYF GFTHCRKVCP RSLACMTAAL DTLGETRRMV
VPLYITVDPE RDTPERMKAF VEANFPRFTG LTGSREAIDS AKASFRVFSR KGLDPEDAEG
YAMPHTAFAY LLGPDGKYLA HFMDTIDDLQ MANRLRILLA ETERVT
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