| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_7271 |
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| Symbol | |
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| ID | 7380497 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011981 |
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| Strand | - |
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| Start bp | 226099 |
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| End bp | 227079 |
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| Gene Length | 981 bp |
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| Protein Length | 326 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 643641361 |
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| Product | ABC transporter membrane spanning protein (oligopeptide) |
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| Protein accession | YP_002539658 |
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| Protein GI | 222102619 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG0601] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTCGCAT TGAATTTCCT CGTCAGACGG CTGTTTCAGG GTGCGATTAT TATTTTTCTG
GTGTCTTTGC TGATCTTCAC CCTGCTGCGG GTGGTGCCGG GCGATCCCGT GCGCATGATG
GCGGGTGGCA TGGCTCCTGA AGCCCTGATC GAGAAAATCG CCAAGGATAT GGGATTGCGT
GATCCGATTC TCGTTCAGTT CGGGCGCTAT ATGTCTGGCG TGGTGCAAGG TGACCTTGGC
GAATCCTTTG TGCGGCCCGC CAATGGCGCG GCAACAGGCG GCTCTAGCTT CAACGATACA
ACGCGGGGCG AGCGCGCCAA GGTTTTCACC CTGATTTTTG ATGCGCTGCC CATGACCTTG
CAACTGGCGG CGGTTACGCT TGTGATAGCC CTGGTATTTT CCAGCATTGT CGGTGTAGCG
GGAGGATTGG CACCGGGGCG ATGGCCGGAC AAGCTTGCCT TCTATATCTC CTCGATTTTC
ATATCCCTGC CGAATTTCTG GCTTGGAATC GTGCTGGCCT TGCTGTTTTC GGTCAAGCTC
GGCTGGCTTC CGGCCATCGG CTATCAGGGC TTTGCCTATA CCATCCTGCC CGCCATCGTC
CTGGCCGTAG AGCTTGCGCC GGTGTTGATC CGCACGCTGG TCAGTTCCGT CTCTGCCCAG
ATGATGGAGC CTTACGTGTC TGTCGGACGG GTTCGTGGCC TGAGCAATAC CCGTATCATT
GCCAATCATG CGCTGCGCAA TGCGTCCGTG CCGTTGCTCA ATCTGCTGGG CGTGCAATTT
TCCAGTCTGC TCGGCGGCGT GATCATCGTT GAATATATCT TCGATTACCC CGGCCTTGGC
CTGCTGACCA TCAACGCCGT GCTGCAACGG GATTTTCCGC TGATCCAAGG CATTGCCATC
GTCACCAGCG CCATCTTCGT GCTGATCAAC ATCCTCGTTG ATCTCGTTGC CACCACCATT
GATCCGAGGC TCGAATACTG A
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| Protein sequence | MFALNFLVRR LFQGAIIIFL VSLLIFTLLR VVPGDPVRMM AGGMAPEALI EKIAKDMGLR
DPILVQFGRY MSGVVQGDLG ESFVRPANGA ATGGSSFNDT TRGERAKVFT LIFDALPMTL
QLAAVTLVIA LVFSSIVGVA GGLAPGRWPD KLAFYISSIF ISLPNFWLGI VLALLFSVKL
GWLPAIGYQG FAYTILPAIV LAVELAPVLI RTLVSSVSAQ MMEPYVSVGR VRGLSNTRII
ANHALRNASV PLLNLLGVQF SSLLGGVIIV EYIFDYPGLG LLTINAVLQR DFPLIQGIAI
VTSAIFVLIN ILVDLVATTI DPRLEY
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