| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_7267 |
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| Symbol | amaB |
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| ID | 7380493 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011981 |
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| Strand | - |
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| Start bp | 221233 |
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| End bp | 222468 |
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| Gene Length | 1236 bp |
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| Protein Length | 411 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 643641357 |
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| Product | allantoate amidohydrolase |
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| Protein accession | YP_002539654 |
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| Protein GI | 222102615 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0624] Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases |
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| TIGRFAM ID | [TIGR01879] amidase, hydantoinase/carbamoylase family |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTCGATA CATTGTCATC CTTCGGCGGC GGTCCGGACG GTTCCATGAA CCGGCTTACA
TTGTCGCAGG AAGATGGCAG GGCGCGCGAC TGGCTTGCGT CCTGGTTTGC TGAAAATGGG
TTTGTCCAAT CCGTGGACGC CATTGGCAAT CAGTTTGGTT CAGCACCGCT GGCCGGGGCA
AATGCCCCTG TCGTCATGGT TGGTTCTCAC ATTGACAGTC AGCCGAATGG TGGGCGTTTT
GATGGAGCAC TGGGCGTCGT TGCGGCCTGC GAGGCCGTTT TGGCGGTGCG TGAACGATTG
GCGGCGGAAA ATCGTCTTGC GGCCTGCAAT TTCCAGGTCG TGAACTGGAC AAATGAGGAA
GGGGCGCGGT TTCAACCGAG CCTGTTGGGA AGTAGCGTTT TTACCGGTGC GGCCGAACTG
GACTGGGCGC TTGACAGGGC CGATGGCAAC GGCGTCACGG TTCGCCAGTC GCTTCAGGAG
ATTGGCTATG CGGGCAAGGA CAAGGTACCC GTGCCCGACG CCTTGATCGA GCTGCACATT
GAAGGTGCAA GCACTCTGTT CGACGCTGAG GAGAAATTCG GGGCCTTCAC CCGTTTCTGG
GGGGCCACAA AATACCGCCT CGCTTTTCTC GGCTGCCAGG CTCACACCGG TCCGACACCC
ATGGCGGAGC GCAAGGATGC ACTGTTGGGC GCCGCCTATC TGATGGCCGA TCTGCGGGCT
ATGGTGGACG CTTACGGACT TGACCTTCAC ACCTCTGTTG GCCGTCTGGA GGTTTTTCCC
AATTCGCCCA ATATCGTTCC GGCGGAAGCC GTGCTGTTCA TCGAGTTGCG ATCTGCCTCG
CCGGAGATTT TGGAGGAGGC AGAACAGAAG CTGAAGGTTG CGGCTGAAAC TGCTGCTGCA
AAAGCTAAAA TCGATTATGA AATACGCTCC ATTGACCGTC GCAAGGCAGG CAATTTTGCG
CCCGGTCTGA TTGCCCTGGC AGAACAGACG GCCAAAAGCT ACGGCGAGCC GATGCGCCAC
CTCGATACGG TCGGCGGCCA TGACGCCGTG GCGCTGTCAG CTGTTTGTCC AGCCGTGGTG
CTTGCCGTGC GCAGCCAGAA CGGCGTCATT CATCACCCCA CGGAATATAC GACACCAGAA
GACCAGGCAT TTGGCACGCA GGTTCTGGCC GACATGCTCT ATCGCCTTGC CTGCGACGGG
CTGGAGGCTG CGCAGCACAA TGAGGCGGCG CAATGA
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| Protein sequence | MVDTLSSFGG GPDGSMNRLT LSQEDGRARD WLASWFAENG FVQSVDAIGN QFGSAPLAGA
NAPVVMVGSH IDSQPNGGRF DGALGVVAAC EAVLAVRERL AAENRLAACN FQVVNWTNEE
GARFQPSLLG SSVFTGAAEL DWALDRADGN GVTVRQSLQE IGYAGKDKVP VPDALIELHI
EGASTLFDAE EKFGAFTRFW GATKYRLAFL GCQAHTGPTP MAERKDALLG AAYLMADLRA
MVDAYGLDLH TSVGRLEVFP NSPNIVPAEA VLFIELRSAS PEILEEAEQK LKVAAETAAA
KAKIDYEIRS IDRRKAGNFA PGLIALAEQT AKSYGEPMRH LDTVGGHDAV ALSAVCPAVV
LAVRSQNGVI HHPTEYTTPE DQAFGTQVLA DMLYRLACDG LEAAQHNEAA Q
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