| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_7253 |
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| Symbol | |
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| ID | 7380399 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011981 |
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| Strand | - |
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| Start bp | 210134 |
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| End bp | 210982 |
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| Gene Length | 849 bp |
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| Protein Length | 282 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 643641345 |
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| Product | ABC transporter |
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| Protein accession | YP_002539642 |
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| Protein GI | 222102603 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG4176] ABC-type proline/glycine betaine transport system, permease component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.417168 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGACACCT CCGTTATTAC AGACAGCTTC GATGAACACA TTGACGACAC GCTCAACTGG
ATCAGCGATC ATGCCTCATG GCTGTTTGAT TCCATCAGAG CGGTGCTGGA AGGCACCTAT
GGCGGCGTTC TCTGGCTGTT TCAGCTTGCG CCATTCTATG TGGTTGCCTT GATTGCAGCC
CTTCTCGGAT GGCGGTTGAT CAACAGCAAG GCCGGTCTTT TGATCGGTGT CGCCATGCTG
GGCTGCACAG TCATGGGCCT TTGGGCCGAA ACCATGAGCA CTTTGGCGTT GGTCATCACA
GCCACCTTCA TGGCGCTGGT GATCGGCATT CCCGTTGGTA TCGTGGCGGG TTTCGTCCAA
GCCTTCGACA AGATTGTCGA GCCGGTGCTC GATCTCATCC AGACACTGCC ACCTTATATC
TACCTGCTGC CAACCATTGC ACTGATGGGA TATGGACCTG CCACGGCCCT TCTTGCCACG
GTCATTGTCG CCATGCCACC GGCGATCCGG CTGACATCTC TCGGCATCCG CAGAACGCCC
AATGATTTTA TTGAACTGGG ACAGGCCAAC GGCCTGACGT CCTGGCAGAT GTTCGTCAAG
ATCAGACTGC CATTCGCGAT ACCGAGCGTC ATGGCCGGGA TTAACCAGAG CCTGATGATG
GCGTTCGGCA TGGTGGTGAT CGCTGGCATC GTCGGTTCTG GCGGGCTTGG TGAAACCATC
TATAGCGCCG TCAGAACGCT GAATATCGCA ACGTCGATCA ACGCCGCAAT TGCCATTGTC
ATTCTCACCA TGGTGCTTGA TCGACTGACA CAAAGCGCGG CGAACCGTAA CACGGGAGTA
AAATCATGA
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| Protein sequence | MDTSVITDSF DEHIDDTLNW ISDHASWLFD SIRAVLEGTY GGVLWLFQLA PFYVVALIAA
LLGWRLINSK AGLLIGVAML GCTVMGLWAE TMSTLALVIT ATFMALVIGI PVGIVAGFVQ
AFDKIVEPVL DLIQTLPPYI YLLPTIALMG YGPATALLAT VIVAMPPAIR LTSLGIRRTP
NDFIELGQAN GLTSWQMFVK IRLPFAIPSV MAGINQSLMM AFGMVVIAGI VGSGGLGETI
YSAVRTLNIA TSINAAIAIV ILTMVLDRLT QSAANRNTGV KS
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