Gene Avi_7235 details

Gene Information

• Locus tag: Avi_7235
• ID: 7380386
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Agrobacterium vitis S4
• Kingdom: Bacteria
• Replicon accession: NC_011981
• Strand: +
• Start bp: 198046
• End bp: 198699
• Gene Length: 654 bp
• Protein Length: 217 aa
• Translation table: 11
• GC content: 56%
• IMG OID: 643641333
• Product: ABC transporter membrane spanning protein
• Protein accession: YP_002539630
• Protein GI: 222102591
• COG category: [P] Inorganic ion transport and metabolism
• COG ID: [COG2011] ABC-type metal ion transport system, permease component

Plasmid Coverage information

• Num covering plasmid clones: 10
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCACCAC TGATGTATGA ACGCTTGGGC CGCGCCTTTT TGGACACCAT CACCATGGTG 
GGGATCTCGG CGCTGTTTGC ACTTGTCGTT GGTATTCCGC TTGCGGTTTT CCTTGTGCTG 
TCCTCGCCCG GTGGGTTGAT TGAGGCACCG CGCACCAACC GGATACTGGG TGCGCTGATC 
AACGGCTTTC GCGCCACACC TTTCATCGTC CTGATGGTGG CATTATTGCC TTTTACTCGG 
CTGGTCACGG GTACCACCAT CGGCGTATGG GCCGCCATCG TGCCACTGTC GATCAGTGCC 
ACGCCCTTTT TTGCCCGCAT TGCCGAAGTC AGTTTGCGCG AGGTGGATCA TGGATTGATT 
GAAGCCGCGC AGGCCATCGG GTGTCGCCGC TGGCATATTA TTCGTCATGT GCTGTTGACC 
GAATCCTTGC CCGGTCTGGT AGGCGGTTTT ACCATCACTA TTGTAACGAT GATCGGGGCT 
TCAGCCATGG CCGGAGCCGT GGGTGCAGGC GGGCTTGGCG ATATGGCCAT CCGCTATGGC 
TATCAACGGT TTGATACCAC AGTGATGATT GCAGTGATCA TCGTTTTAAT TGCCACGGTC 
TGCCTTGTCC AGTTTACTGG AGACCTCATC GTCCGTCGCT TGCAGGCGCA GTAA 

 

Protein sequence

MSPLMYERLG RAFLDTITMV GISALFALVV GIPLAVFLVL SSPGGLIEAP RTNRILGALI 
NGFRATPFIV LMVALLPFTR LVTGTTIGVW AAIVPLSISA TPFFARIAEV SLREVDHGLI 
EAAQAIGCRR WHIIRHVLLT ESLPGLVGGF TITIVTMIGA SAMAGAVGAG GLGDMAIRYG 
YQRFDTTVMI AVIIVLIATV CLVQFTGDLI VRRLQAQ