Gene Avi_7231 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvi_7231 
Symbol 
ID7380383 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAgrobacterium vitis S4 
KingdomBacteria 
Replicon accessionNC_011981 
Strand+ 
Start bp195319 
End bp195960 
Gene Length642 bp 
Protein Length213 aa 
Translation table11 
GC content58% 
IMG OID643641330 
ProductABC transporter membrane spanning protein 
Protein accessionYP_002539627 
Protein GI222102588 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG2011] ABC-type metal ion transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones6 
Plasmid unclonability p-value0.238623 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTGACC TTCTCCTCAG TGCTCTCTGG GAAACGGTGC TGATGACCGT TGCTTCTGGC 
CTGATTTCGC TGGTGGCTGG CCTGCCGCTT GGTCTGGCGC TGGTGGTGAC GGCAAAGGGT 
GGCATTGCCG AACATCTATG GATCAACCGC GTGCTTGGAG CCGTGGTCAA TGCCTTTCGC 
TCCATTCCGT TTATTATTCT GCTGGTGGCG CTCATCCCGT TGACCCGGTT GATAGTTGGC 
ACAGCGCTTG GTACCTGGGC GGCGATTGTA CCGCTGGCCA TCGCGGCCAC GCCCTATTAT 
GCCCGCATTG CCGAAGTGTC GTTGCGGGAG GTGGATCGCG GCTTGATCGA AGCGGTGCGC 
GCCATGGGTG GCAATCGCTG GACCATCATC CGCGAAGTTC TGGTCCCTGA AGCGCTTCCC 
GGTATTATTT CCGGCTTTAC CGTCACACTT GTCACCCTCA TCGGCGCATC CGCCATGGCG 
GGCGCGATTG GTGCCGGTGG GCTTGGCGAT CTGGCCATTC GGTATGGCTA TCAGCGGTTC 
GAAACAACGG TGATGATTGC CGTGGTTATT GTGCTGATCA TCCTTGTCTG CGGTATCCAA 
TGGCTGGGTG ATCGATTGGT TGCACAACTG GACAGACGAT AA
 
Protein sequence
MIDLLLSALW ETVLMTVASG LISLVAGLPL GLALVVTAKG GIAEHLWINR VLGAVVNAFR 
SIPFIILLVA LIPLTRLIVG TALGTWAAIV PLAIAATPYY ARIAEVSLRE VDRGLIEAVR 
AMGGNRWTII REVLVPEALP GIISGFTVTL VTLIGASAMA GAIGAGGLGD LAIRYGYQRF 
ETTVMIAVVI VLIILVCGIQ WLGDRLVAQL DRR