| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_7225 |
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| Symbol | |
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| ID | 7380379 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011981 |
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| Strand | + |
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| Start bp | 191612 |
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| End bp | 192271 |
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| Gene Length | 660 bp |
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| Protein Length | 219 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 643641326 |
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| Product | ABC transporter membrane spanning protein (amino acid) |
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| Protein accession | YP_002539623 |
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| Protein GI | 222102584 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0765] ABC-type amino acid transport system, permease component |
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| TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTGGATT CGCTTGTCCC TCTTCTGTGG GCAGGGTTGG TGTTTACCAT TCCGCTAACG
ATACTTTCCT TCACGTTCGG CTTGACACTT GGGCTTGTTA CGGCCATCGG CCGGCTGTTC
GGAGCGAAAC CGGTGGCGGC GATTGCCCGC TTTTATGTTT GGGTCATTCG TGGCACCCCT
CTACTTGTCC AGCTTTTTGT AATTTTCTAC GGCTTGCCAA GCATTGGTAT TTTGCTGGAT
GCCTTTCCAG CGGCGCTCAT CGGCTTCACG CTGAACATAG GGGCCTATAG TTCTGAAATC
ATTCGCGCTG TCATCTCCTC CGTGCCGAAG GGACAATGGG AAGCGGCCTA TTCGATTGGT
ATGAGCTGGC GTCAAGCCAT GCTGCGCACG ATCCTGCCGC AAGCGGCTCG TGTCGCCGTG
CCGCCGCTGT CCAACACGTT CATCTCTCTG GTGAAAGATA CGTCGCTCGC TGCCGCCATT
ACCGTGCCAG AACTGTTTCA GGCGGCTCAA CGCATTGTCG CCACCACCTA TGAACCACTG
ATCCTCTATA TCGAAGCGGC ATTGATCTAT CTTGCCCTGT GCTCTGTGCT CTCGACAGTG
CAGGTGCGGT TGGAGCGTCG CTTTGCCCGC TATGGCGGTA TGATGGAGTC CAACGCATGA
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| Protein sequence | MVDSLVPLLW AGLVFTIPLT ILSFTFGLTL GLVTAIGRLF GAKPVAAIAR FYVWVIRGTP
LLVQLFVIFY GLPSIGILLD AFPAALIGFT LNIGAYSSEI IRAVISSVPK GQWEAAYSIG
MSWRQAMLRT ILPQAARVAV PPLSNTFISL VKDTSLAAAI TVPELFQAAQ RIVATTYEPL
ILYIEAALIY LALCSVLSTV QVRLERRFAR YGGMMESNA
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