| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_7220 |
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| Symbol | |
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| ID | 7380375 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011981 |
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| Strand | + |
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| Start bp | 188026 |
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| End bp | 188994 |
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| Gene Length | 969 bp |
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| Protein Length | 322 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 643641322 |
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| Product | ABC transporter substrate binding protein (aliphatic sulfonate) |
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| Protein accession | YP_002539619 |
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| Protein GI | 222102580 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0715] ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components |
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| TIGRFAM ID | [TIGR01728] ABC transporter, substrate-binding protein, aliphatic sulfonates family |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0943127 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGGCGGA TATTGAAGCG GCTAATCGCA ACGGCTTGTT TACTGGCTTT TGGAACGGTG
TCTTCTTTTG CGGCAGATCC CAAGGAGATT ACGCTGGATT GGGCAACCTA TAATCCGGTC
AGTCTGATCT TGAAAAAGCA AGGCTTGCTG GAAAAGGAAT TTGCCAAGGA CGGCATTTCC
ATTCGTTGGG TGCAGTCGGC TGGCTCCAAC AAAGCGCTCG AGTTTCTCAA TGCCGGGTCG
ATCGATTTTG GCTCCACAGC GGGGGCTGCT GCCCTGATCG GCAAGATCAA CGGCAATCCC
ATCAAATCGG TCTATGTCTA CTCAAAGCCA GAATGGACCG CTCTGGTGAC CCGGGCGGAA
ACGGGCATCA CAAAGCCTGC TGACCTCAAG GGGAAATCAA TTGCGGTCAC GCGTGGCACC
GATCCACATA TCTTTCTGGT GCGCGCGCTG GCCGATGCCG GTTTGACCGA AAAAGACGTA
AAGCTTGTTC TCTTGCAACA CGCCGATGGA AAGCTTGCGC TGCTGCGCGG CGATGTCGAT
GCCTGGGCAG GCCTTGATCC ATTGATGGCC TCGGCTGAGG TCGAGAACGG CGCGGTTCTT
TTCTACCGCA AGCCGCAAGA CAATACATGG GGCGTGTTAA ACACACGGGA AGAGTTTGCC
AAGGAGCATC CCGCGTTGGT CAAGCGGGTT CTGGCTGTCT ACGATCAGGC ACGCCGGGAG
GCGATTGCCC ATCCTGATGC CTTGAAAGTG GCATTGGAAG AAGCTGCCAA GCTGCCGGGA
CCTGTGATTG CCAAACAGCT TGAACGCACA GATCTGTCAT CATCGCAGAT TGGACCAGCC
CAGCGCGACA CCATTTTCCA AGCGGGTGTC GCTTTGCAAA AGGCTGGCGT CATCGGTGCC
GAGGTGGATG TCGCAAAGGC TGTTGACGGG CTGATTGATC CGCAATTCAG CTCCGGTCTT
GGACAATAG
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| Protein sequence | MGRILKRLIA TACLLAFGTV SSFAADPKEI TLDWATYNPV SLILKKQGLL EKEFAKDGIS
IRWVQSAGSN KALEFLNAGS IDFGSTAGAA ALIGKINGNP IKSVYVYSKP EWTALVTRAE
TGITKPADLK GKSIAVTRGT DPHIFLVRAL ADAGLTEKDV KLVLLQHADG KLALLRGDVD
AWAGLDPLMA SAEVENGAVL FYRKPQDNTW GVLNTREEFA KEHPALVKRV LAVYDQARRE
AIAHPDALKV ALEEAAKLPG PVIAKQLERT DLSSSQIGPA QRDTIFQAGV ALQKAGVIGA
EVDVAKAVDG LIDPQFSSGL GQ
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