| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_7201 |
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| Symbol | |
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| ID | 7380361 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011981 |
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| Strand | - |
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| Start bp | 168138 |
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| End bp | 169769 |
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| Gene Length | 1632 bp |
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| Protein Length | 543 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 643641309 |
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| Product | ABC transporter nucleotide binding/ATPase protein (peptide) |
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| Protein accession | YP_002539606 |
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| Protein GI | 222102567 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1123] ATPase components of various ABC-type transport systems, contain duplicated ATPase |
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| TIGRFAM ID | [TIGR02323] phosphonate C-P lyase system protein PhnK |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.0277171 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCCCGC TGATCCAGAT CCGCAATCTC ACCATCGGCT TTCCAAAAGA CGGGCGTGAC
CATAACGTTG TGCATGGCCT TGATCTGACA ATCCATGCTG GGGAAACCCT GGCCCTTGTT
GGCGAGTCCG GCTCTGGCAA ATCTGTTACG GCACGCGCGC TGCTTGGCTT GTCTGGTCCG
GGCGCAAAAA TCAGCGCTGA CCAATTCGAC ATCGAAGGCC AGTCGGTGTT GGGTTTTGGT
GAAAAACAAT GGCGCGCTTT GCGCGGCACA AAGGTGGGCT TTGTGCTTCA GGATGCGCTG
GTGTCGCTCG ATCCCTTGCG CCGCGTTTCG CAGCAATTGT CCGATGCCTT TGGCAGGCGC
GGCTTTTTCA AACACCCGGA TTTGCTGCAA AATAGCCGCG CTCTGCTGCA ATCGGTCGGC
ATTCCTGATC CTGATCGACG CTTGCCGCAA TATCCGCACG AGCTCTCCGG CGGCTTGCGC
CAACGCGCAT TGATTGCCAC AGCCATTGCC CGCCACCCTG CCCTGCTGAT TGCCGATGAG
CCAACCACGG CGCTGGATGC CACGGTGCAA AAGCAAATTC TTGATCTGTT GGCAGAACGG
CGCAAGGCGG GCCATACACT GCTGCTGATC AGCCATGATC TTGCTGTTGT CTCACGGTTG
GCCGACCGGG TGTTGGTGAT GAACAATGGA TACATTGTTG AGGAAGGCCC AACCGCTAAA
ATCCTGAAGA CCCCGGAGCA TCCTTATACA CGGCAATTGC TGGATGCGGT GCCATCGGCA
AGCTCCAAAG GCTTTCGTTT GTCGCCTTCG ACAGAGATCG AGTTGAAACG CCCTGCTGAG
CCTATCCGCA TTGCCCTGCC GCCTAAGCAG ATTGACGATG GCCGCATTGT TTTGAGCGCC
AACAATCTGG TGAAACGCTA TGGCACCTCG CTTGCCGTCA ATGACGTTTC CTTCCATCTC
GCAGCTGGCG AAGCGCTGGG CATTGTTGGC GAATCAGGAT CGGGCAAAAC CACCGTTGCC
AAAATCATTC TCGGGCTTGT GGAGCCAGAT GGTGGCTCTG TGCTGATTGA TGGCAAACCG
TGGAGCAATA TCAGCGAGGC CCAGCGCAGA CCCAGACGCG CCCATATGCA ATTGATTGCG
CAAGATGCCC TCAGCTCGTT TGATCCCCGA TACACGGTGG AGAAAATCGT TGGCGAAAGC
CTTGATTCCG TTGGCGTCTA TGGCGATGCC CGCCGTGCGC GGGTGATTGA AGTGCTGGAT
GCCGTGCGGC TCAACCGCAG CTTCCTTTCC CGCTATCCCC GTGAATTGTC CGGTGGCCAA
CGCCAGCGAG TGGCCATTGC CCGTGCCTTT GCCCCACACC CCACACTGCT GGTGGCCGAT
GAACCGGTGA GCGCGCTGGA TGTTTCGGTG CAGGCGCAGG TGTTGGATTT GCTGGCCGAA
CTTCAAGCCG CATCGGGCAC ATCGCTGCTG TTTATCTCCC ATGATCTGGG CGTTGTGCAT
CACCTGACAG ACCGTGTGGT GGTGATGAAG GATGGCCGGA TTGTCGAGGC CGGTCAGGTG
GAAAACGTGT TTTCCACCCC ACGCCACAGC TACACCCGCG CTCTTCTGGA TGCCGTTCCC
ACACTTGCCT GA
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| Protein sequence | MTPLIQIRNL TIGFPKDGRD HNVVHGLDLT IHAGETLALV GESGSGKSVT ARALLGLSGP
GAKISADQFD IEGQSVLGFG EKQWRALRGT KVGFVLQDAL VSLDPLRRVS QQLSDAFGRR
GFFKHPDLLQ NSRALLQSVG IPDPDRRLPQ YPHELSGGLR QRALIATAIA RHPALLIADE
PTTALDATVQ KQILDLLAER RKAGHTLLLI SHDLAVVSRL ADRVLVMNNG YIVEEGPTAK
ILKTPEHPYT RQLLDAVPSA SSKGFRLSPS TEIELKRPAE PIRIALPPKQ IDDGRIVLSA
NNLVKRYGTS LAVNDVSFHL AAGEALGIVG ESGSGKTTVA KIILGLVEPD GGSVLIDGKP
WSNISEAQRR PRRAHMQLIA QDALSSFDPR YTVEKIVGES LDSVGVYGDA RRARVIEVLD
AVRLNRSFLS RYPRELSGGQ RQRVAIARAF APHPTLLVAD EPVSALDVSV QAQVLDLLAE
LQAASGTSLL FISHDLGVVH HLTDRVVVMK DGRIVEAGQV ENVFSTPRHS YTRALLDAVP
TLA
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