Gene Avi_7198 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvi_7198 
Symbol 
ID7380358 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAgrobacterium vitis S4 
KingdomBacteria 
Replicon accessionNC_011981 
Strand
Start bp164673 
End bp165746 
Gene Length1074 bp 
Protein Length357 aa 
Translation table11 
GC content54% 
IMG OID643641306 
ProductABC transporter substrate binding protein (aliphatic sulfonate) 
Protein accessionYP_002539603 
Protein GI222102564 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0715] ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0232268 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAATCTG CCTTTCTTTT GCGTATCGCA ACCAGCCTTG GTCTGCTGGC GCTTGTATCC 
GGCCCTTTGC AGGCGGCAGA CCCTCTGGTG ATCCATGTGG GCTACGCGGC GATCGGTGTC
GATAATCGTC CCTTTGCCGA GGGAACATCG GCGGCCACGG CCCGCGCTGG CGAATATCTC
GAAAAAGAAT TCGCCAATGA TCCAAACGTC AAGATCGAAT GGACCTTTTT CAAGGGTGCA
GGGCCAGCGG TGAATGAAGG CTTTGCCAAC AACCAGCTGG ATTTTGCCTA TCAGGGCGAT
TTGCCTGCCA TTATTGGCCG CGCCAATGGG TTGAAAACCA AATTTTTGCT GGCAAGTGGC
GCTAGAAAGC CGCTGTACCT GGCTGTTGCC AACGGATCGG GGATCAAAAC GGTTGAAGAG
CTGAAAGGCA AAAAAGTCGC TTATCAACGC GGCACCAATG GCCATCTTGC TGCCGTCAAG
ATTCTGGAAG CCCACGGACT GAAAGAGCGC GATGTGCAGG TGATCAATCT GGATAGCGCA
GGCACGGTTG CTGCCCTGAC CAGCAAAGAT ATTGATGCTG CCTTTGGTGA TACAGCCTTG
ATCAATCTGG CCGCCAACGG TTCTGCCGAG ATTGTTTACA CCACCAAGGG TGATGATCCG
CGCTTTGGCC GCAACGCTGG CATTGTCGCG CGCGAAGCGT TTATCGACGC CCATCCAGAG
ATCACCCAGA AGGTGGTGGA TGCCTTTGTG AAAGCCGCCA AATGGTCGTC AGATGAGCCA
AACCGTGCCG CGCTTTTTGA GCTGTGGCAC AAATCCGGCA CGCCCGTGCC AATCCTGGAA
GATTATTTCA GCAACGACAC TTTGGCCTAT CGCAACGCGC CACTGCTCGA TGAGCTGCTG
ATTTCGCAAT ACAAGGAGCA GGCTGTGAAA AGCAAAGAGT TTGGCCTGAT CCGCCGCGAT
GTCGATCTGA ACGGCTGGTT TGAGCCGAAA TATCTCAACA GCTCTTTTGA ACGCCTTGGC
CTGAAAACCT TTTGGAAGGC CTATGGCGCA GACGGCAAGC CGAGCGCGTC TTAA
 
Protein sequence
MKSAFLLRIA TSLGLLALVS GPLQAADPLV IHVGYAAIGV DNRPFAEGTS AATARAGEYL 
EKEFANDPNV KIEWTFFKGA GPAVNEGFAN NQLDFAYQGD LPAIIGRANG LKTKFLLASG
ARKPLYLAVA NGSGIKTVEE LKGKKVAYQR GTNGHLAAVK ILEAHGLKER DVQVINLDSA
GTVAALTSKD IDAAFGDTAL INLAANGSAE IVYTTKGDDP RFGRNAGIVA REAFIDAHPE
ITQKVVDAFV KAAKWSSDEP NRAALFELWH KSGTPVPILE DYFSNDTLAY RNAPLLDELL
ISQYKEQAVK SKEFGLIRRD VDLNGWFEPK YLNSSFERLG LKTFWKAYGA DGKPSAS