Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avi_7198 |
Symbol | |
ID | 7380358 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Agrobacterium vitis S4 |
Kingdom | Bacteria |
Replicon accession | NC_011981 |
Strand | - |
Start bp | 164673 |
End bp | 165746 |
Gene Length | 1074 bp |
Protein Length | 357 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 643641306 |
Product | ABC transporter substrate binding protein (aliphatic sulfonate) |
Protein accession | YP_002539603 |
Protein GI | 222102564 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0715] ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.0232268 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAATCTG CCTTTCTTTT GCGTATCGCA ACCAGCCTTG GTCTGCTGGC GCTTGTATCC GGCCCTTTGC AGGCGGCAGA CCCTCTGGTG ATCCATGTGG GCTACGCGGC GATCGGTGTC GATAATCGTC CCTTTGCCGA GGGAACATCG GCGGCCACGG CCCGCGCTGG CGAATATCTC GAAAAAGAAT TCGCCAATGA TCCAAACGTC AAGATCGAAT GGACCTTTTT CAAGGGTGCA GGGCCAGCGG TGAATGAAGG CTTTGCCAAC AACCAGCTGG ATTTTGCCTA TCAGGGCGAT TTGCCTGCCA TTATTGGCCG CGCCAATGGG TTGAAAACCA AATTTTTGCT GGCAAGTGGC GCTAGAAAGC CGCTGTACCT GGCTGTTGCC AACGGATCGG GGATCAAAAC GGTTGAAGAG CTGAAAGGCA AAAAAGTCGC TTATCAACGC GGCACCAATG GCCATCTTGC TGCCGTCAAG ATTCTGGAAG CCCACGGACT GAAAGAGCGC GATGTGCAGG TGATCAATCT GGATAGCGCA GGCACGGTTG CTGCCCTGAC CAGCAAAGAT ATTGATGCTG CCTTTGGTGA TACAGCCTTG ATCAATCTGG CCGCCAACGG TTCTGCCGAG ATTGTTTACA CCACCAAGGG TGATGATCCG CGCTTTGGCC GCAACGCTGG CATTGTCGCG CGCGAAGCGT TTATCGACGC CCATCCAGAG ATCACCCAGA AGGTGGTGGA TGCCTTTGTG AAAGCCGCCA AATGGTCGTC AGATGAGCCA AACCGTGCCG CGCTTTTTGA GCTGTGGCAC AAATCCGGCA CGCCCGTGCC AATCCTGGAA GATTATTTCA GCAACGACAC TTTGGCCTAT CGCAACGCGC CACTGCTCGA TGAGCTGCTG ATTTCGCAAT ACAAGGAGCA GGCTGTGAAA AGCAAAGAGT TTGGCCTGAT CCGCCGCGAT GTCGATCTGA ACGGCTGGTT TGAGCCGAAA TATCTCAACA GCTCTTTTGA ACGCCTTGGC CTGAAAACCT TTTGGAAGGC CTATGGCGCA GACGGCAAGC CGAGCGCGTC TTAA
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Protein sequence | MKSAFLLRIA TSLGLLALVS GPLQAADPLV IHVGYAAIGV DNRPFAEGTS AATARAGEYL EKEFANDPNV KIEWTFFKGA GPAVNEGFAN NQLDFAYQGD LPAIIGRANG LKTKFLLASG ARKPLYLAVA NGSGIKTVEE LKGKKVAYQR GTNGHLAAVK ILEAHGLKER DVQVINLDSA GTVAALTSKD IDAAFGDTAL INLAANGSAE IVYTTKGDDP RFGRNAGIVA REAFIDAHPE ITQKVVDAFV KAAKWSSDEP NRAALFELWH KSGTPVPILE DYFSNDTLAY RNAPLLDELL ISQYKEQAVK SKEFGLIRRD VDLNGWFEPK YLNSSFERLG LKTFWKAYGA DGKPSAS
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