Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avi_7190 |
Symbol | |
ID | 7380350 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Agrobacterium vitis S4 |
Kingdom | Bacteria |
Replicon accession | NC_011981 |
Strand | - |
Start bp | 155286 |
End bp | 156047 |
Gene Length | 762 bp |
Protein Length | 253 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 643641298 |
Product | Nitroreductase |
Protein accession | YP_002539595 |
Protein GI | 222102556 |
COG category | [C] Energy production and conversion |
COG ID | [COG0778] Nitroreductase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.561189 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGCCACCCA GCTGGAATGA GACGCTGGAT GTGTTGCTGA ACCATCGTTC CGCACGCGCC TATCTGCCCA AAGCCCTGCC GCAAGGCACG GTGGAACTGC TGGTAGCAGC AGCACAATCG GCTCCCACCT CCTCCAATCT GCAAGCGTGG AGCGTGGTGG CTGTTGAAGA CCCGGAGCGC AAGGCGCGTC TGGAAGAATT TGCCGCTCCC AATCCGCAAA TCAATGCTGC GCCGCTGTTT CTGGTCTGGC TGGTCGATCT CGCCCGGCTA AGAGCCATTG CCCGCAGCAA TGACAGCGAG GGTGCAGGAC TGGATTATCT GGAAAGCTTT GTGATTGGCG CGATTGATGC CGCCCTTGCC GCCCAGAATG CGGTGGCGGC CATTGACTCG CTTGGTCTTG GCTCGTGTTA TATCGGCGGC ATCCGCAATC GGCCAGAGGA TGTGGCGCGG GAATTGAATC TGCCGCCTGA AACCATCGCT GTGTTTGGCC TCACAGTGGG CTATCCCGAT CCAGCGGTAA AAACCGATGT AAAGCCGCGC CTGCCGCAAT CGGCAGTGCT GTTTCGGGAG CAATATGGCA CGGTGAGTGA ACAGGATCTG GCCAGCTATG ATGAGCGGCT AAAAACCTTC CAGCAAGGCC AAAATCTGCC GCAAGCGGGA TGGACCAGCG TGATTGCCAA GCGCATTGGC AGTGCGAGCG CTCTCAAAGG CCGGGTTGAA TTGACCGCCA TTTTGCGGCG CTTTGGTTTT GCCTTGAAGT AA
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Protein sequence | MPPSWNETLD VLLNHRSARA YLPKALPQGT VELLVAAAQS APTSSNLQAW SVVAVEDPER KARLEEFAAP NPQINAAPLF LVWLVDLARL RAIARSNDSE GAGLDYLESF VIGAIDAALA AQNAVAAIDS LGLGSCYIGG IRNRPEDVAR ELNLPPETIA VFGLTVGYPD PAVKTDVKPR LPQSAVLFRE QYGTVSEQDL ASYDERLKTF QQGQNLPQAG WTSVIAKRIG SASALKGRVE LTAILRRFGF ALK
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