| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_7183 |
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| Symbol | |
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| ID | 7380345 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011981 |
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| Strand | + |
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| Start bp | 149950 |
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| End bp | 150957 |
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| Gene Length | 1008 bp |
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| Protein Length | 335 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 643641293 |
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| Product | ABC transporter membrane spanning protein (oligopeptide) |
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| Protein accession | YP_002539590 |
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| Protein GI | 222102551 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG1173] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.587678 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACAATTA TCAATGCAAC GACACCGCTC GCCGAGGCTA CGCGCCAGCG TGAAGGGGAA
AAGGCAAGCG TTGAAACGGC CAAAGAGGCC AAAGCCCCCA AAGGCTGGCC CTATGTCCAT
GCACCCGACG CGCTGACAGC CCGCACCAGT CTGATACCAA AACGGGGTCT GCGCCGTGAG
GTCAAAATCT TTCTCACCAA CCCCAATGCG TTGATTGGCG TGGCGTTTCT GGCCATTGTC
ATCATCACAG CGCTTCTGGC TCCCTTGCTT TATCCCGGCG ATCCGCTGGA AATGGTGTCG
CGGCCCTTCC TCTGGCCGGG GCAGAACCCC GCCTATCCAC TGGGAACCGA TTCCATGGGG
CGTGACGTGC TGGCGGGTAT TGTGCACGGG GCACGGGTTT CGCTCACAGT CGGCATTGCC
GCAACCGTGA TGGGGCTGAC CATCGGCGTC ACCATTGGTG CATTTGCAGG CTATTTCGGT
GGCGTGATCG ATGATGTTCT CGTCAAGATC ATCGAGATTT TCCAGACGCT TCCCAGCTTT
GTGCTGCTGG TGGTGTTGGT GGCCATTGCA CAGCCGTCGA TCACCACCGT GACCTTTGCC
ATCGGTATCA TTACATGGCC GATGGTGGCC CGGCTGACCC GCGCCGAATT CCGCGCAATC
CGCGAAAAAG ATTATGTGCT GGCCGCGCGA AGTCTCGGCT ATGGCCATGC CCGCATCGTG
TTTGCAGAAA TTCTGCCCAA TGCCCTGCCG CCGATTATTG TCACATCGTC GGTGATGGTC
GCGGGTGCGA TTTTGATGGA AGCGGCCCTG TCTTTCATGG GTCTGGGCGA TCCAAACCGG
GTCTCCTGGG GTTCGATGAT TGGCTCTGGC CGTGAGGTGA TCCGTACGGC CTGGTATCTC
ACGGCCCTGC CGGGGCTGGC CATTGTGTTT ACGGTCATCT CCCTCAACCT GATCAGTGAC
GGGTTGAATG ATGCGCTCAA TCCCCGCTTT TCGGAGGAAC GTCGATGA
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| Protein sequence | MTIINATTPL AEATRQREGE KASVETAKEA KAPKGWPYVH APDALTARTS LIPKRGLRRE
VKIFLTNPNA LIGVAFLAIV IITALLAPLL YPGDPLEMVS RPFLWPGQNP AYPLGTDSMG
RDVLAGIVHG ARVSLTVGIA ATVMGLTIGV TIGAFAGYFG GVIDDVLVKI IEIFQTLPSF
VLLVVLVAIA QPSITTVTFA IGIITWPMVA RLTRAEFRAI REKDYVLAAR SLGYGHARIV
FAEILPNALP PIIVTSSVMV AGAILMEAAL SFMGLGDPNR VSWGSMIGSG REVIRTAWYL
TALPGLAIVF TVISLNLISD GLNDALNPRF SEERR
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