| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_7182 |
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| Symbol | |
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| ID | 7380344 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011981 |
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| Strand | + |
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| Start bp | 148964 |
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| End bp | 149953 |
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| Gene Length | 990 bp |
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| Protein Length | 329 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 643641292 |
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| Product | ABC transporter membrane spanning protein (oligopeptide) |
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| Protein accession | YP_002539589 |
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| Protein GI | 222102550 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG0601] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCGCAT CAAACCGAAT ATTGAAACGC GCAAGCCGTG TGACGTTGCA GGCCATACCC
ACCGTTGTGG GCATCGTGAT CCTGAACTTT TTTCTGCTGC AACTGGCACC GGGCGATGCC
GCCGATGTGC TGGCCGCAGA GGCTGGCTCC GCCACCGTCG AGACAATGGC GGATATTCGC
GCGCGCTTTG GTCTTGATCT GCCCGTGCTG CACCAACTGG GCAATTATCT TGGTAATCTT
GCTCATTTCA GTCTGGGGTA TTCGCCGCGC TATGGCATGC CGGTGGCCGA GCTGATTGGG
CAACGACTGC CCGGCACATT GGTGCTGATG GGGGCGGCCT TTATCATTGC GCTTGTGCTT
GGGGTGGTGC TTGGCTCCGT CATGGCGGTG TTTTCGGGTC GCCTGCCGGA CCGGGTCATC
TCCCTTGGTT CGCTGCTGTT TTATTCCGTA CCCGGTTTCT GGATCGGTTT GATGCTGATC
CTGCTGTTTT CCGTCAAGCT GGGTTGGTTG CCTTCCGGCG GTGATAGCAC CATTGGCAGC
CCGCTGACCG GCTATGCGGC GCTTTTGGAT CGCGCTCGGT ATATTGTTCT GCCAGCAACT
TCGCTGTCGC TTTATTATTT GGCGATCTAT GCCCGACTCA CCCGCGCCGC CATGCTGGAA
GTGAAATCAC AGGACTATGT GCGCACCGCC CGCGCCAAGG GTGTCACACC GCTTCGGCTG
ACGTTGCGCC ATATCCTGCG CAACGCTTTG ATCCCTATCA CCACCATGGC CGGAATGCAT
CTTGGCGGCA TGCTGGGTGG CGCTGTTGTG GTGGAAACCG TGTTCAGCTG GCCGGGTCTG
GGGCGGCTGG CATTTGAAGC GGTCATGGCC CGTGATTTCA GCGTGCTTTT GGGAATTCTG
CTGCTGTCAT CCTTTTTGGT GATCATCATC AATGCTGCCG TGGATCTGTT TCAGGCCTGG
CTCGACCCGC GGATTGGAGA AAGCCAATGA
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| Protein sequence | MTASNRILKR ASRVTLQAIP TVVGIVILNF FLLQLAPGDA ADVLAAEAGS ATVETMADIR
ARFGLDLPVL HQLGNYLGNL AHFSLGYSPR YGMPVAELIG QRLPGTLVLM GAAFIIALVL
GVVLGSVMAV FSGRLPDRVI SLGSLLFYSV PGFWIGLMLI LLFSVKLGWL PSGGDSTIGS
PLTGYAALLD RARYIVLPAT SLSLYYLAIY ARLTRAAMLE VKSQDYVRTA RAKGVTPLRL
TLRHILRNAL IPITTMAGMH LGGMLGGAVV VETVFSWPGL GRLAFEAVMA RDFSVLLGIL
LLSSFLVIII NAAVDLFQAW LDPRIGESQ
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