Gene Avi_7170 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvi_7170 
Symbol 
ID7380335 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAgrobacterium vitis S4 
KingdomBacteria 
Replicon accessionNC_011981 
Strand- 
Start bp137282 
End bp137860 
Gene Length579 bp 
Protein Length192 aa 
Translation table11 
GC content59% 
IMG OID643641283 
Producthypothetical protein 
Protein accessionYP_002539580 
Protein GI222102541 
COG category[S] Function unknown 
COG ID[COG4950] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones7 
Plasmid unclonability p-value0.318756 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCGATA TTATTGACAC TCTCAGCGGC ATTGCTCCCG GCTCCAAGGG CGAGGCTTTA 
CGCGCCCGCC GCCCGGTGAC GAAAGACGGG GCGCAAGCCA GCTGGCAAGC GCTATTTGCA 
CCCGGCGATG ATAGCCAGTT TTCAATCGAA GAGCGCTTTG CCGTTGCTGT TTTTGTGGCG 
GCCCTGCACG GGCAGCCGGA GATTGCGGCC TTCTACGCGG AAAAGCTTGC GACGAACCCT 
GCGCTTCTGA GCGCCATTCA GACCGCTGCA TCCAAGGGAA CGGCCATTGG GCCTTATGGC 
CATTATCCCG CCGGGCCGCT GTCCTCCGAA AACACCGAAG GGCCTGCCTT TACCGTGGCT 
GACAGCGAAA AAGCCATCCT CGGTGCGCGC TTGAGTGCTG CGCTGGAACA CGCCCATCTT 
CTGATTTTTC ACCTGCGCGA TTCCAAGTCA CAGGCGCTTG ATGCCCTTCT CAAAGCAGGC 
TGGAGCACCA CCGGCATTGT CACGCTGTCG CAGCTGATTT CTTTCCTCGC CTTTCAGATC 
CGCGTTGTTG CCGGTCTGAA AGTCCTGAAC GCCACATAA
 
Protein sequence
MTDIIDTLSG IAPGSKGEAL RARRPVTKDG AQASWQALFA PGDDSQFSIE ERFAVAVFVA 
ALHGQPEIAA FYAEKLATNP ALLSAIQTAA SKGTAIGPYG HYPAGPLSSE NTEGPAFTVA 
DSEKAILGAR LSAALEHAHL LIFHLRDSKS QALDALLKAG WSTTGIVTLS QLISFLAFQI 
RVVAGLKVLN AT