| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_7168 |
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| Symbol | |
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| ID | 7380333 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011981 |
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| Strand | - |
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| Start bp | 135594 |
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| End bp | 136652 |
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| Gene Length | 1059 bp |
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| Protein Length | 352 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 643641281 |
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| Product | hypothetical protein |
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| Protein accession | YP_002539578 |
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| Protein GI | 222102539 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3491] Isopenicillin N synthase and related dioxygenases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.04303 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACACTTC AACAAAAAAT CGCAACCCTG CCCTTTGTGG ATATTGGCCG CTTCCATGCG
GGACCAGAGG AGCGCGCAGC CTTCATCGCA GACCTGCGTC GCATTCTGTT TGATCACGGC
TTTTTCTATC TCACCGGCCA TGGCGTTGAT CCAAAGCTGA TTGCGGATGT GCTCGAGACC
GCCAAACGCT TTTTTGCGCT GCCGCTTGAG GAAAAGCTGA AGATTGAAAT GGTGAAATCC
CGGCACTTTC GCGGCTACAA TCGTGCGGGC TATGAGCACA CCCGTGGTCA GCAGGATTGG
CGCGAACAAC TGGATATAAA TACGGAAGGC ACGCCTGTCG AGATTGGCCC GGAAACACCT
GCGTGGAAAC GTTTGCTCGG GCCAAATCAA TGGCCAGAGG CTATTCCAGA ACTAAAGCCC
CTGCTGCTGA CCTATCAGGC AGAAGTCACC TGCGTTGGCA TTGATGTTTT GAAGGCCATT
GCCGTGGCGC TTGACCAGCC GGAAGATGTG TTTGCGCAGA TCTACGAGCC GCAACCATCG
CAACTGTTGA AAATCATTCG CTATCCCGGG CGGGATGTGG CTGAGACAGA TCAGGGCGTT
GGTGCCCACA AGAACGGCGG CTTCGTCACG GTTCTTTTGC AAGACAAGGT CGAAGGTCTA
CGGGTGCAGA CTGAAGACGG CGTGTGGCTG GATGCTCCGC CCGTACCGGG CACCTTCGTG
GTTAACACCG GGGAATTGCT GGAACTGGCC ACCAATGGCT TCGTGCGGGC CGACGTGCAT
GATGTGGTTG CACCGCCTGC CGGTATCGAG CGCTTCTCCG TCGCCTTCTT CTTAGGCTCG
CGCTACGACG CAACGATTCC GGTGATTACG CTTCCAGACG AGCTGCATCG AAAAGAGCGC
GGCATCACGG TTGATCTGCT GAACCCGATC TTTCGGGAAG TTGGCCAGAA CCATCTCAAA
AGCCGCCTGC GGTCGCACCC CGATGTTGCC CGCGCCCACC ACGCTGATTT GCTCACGCCT
GAGCAATTGG CCGGACAGGC GGTAGCGCAG GCCTATTAA
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| Protein sequence | MTLQQKIATL PFVDIGRFHA GPEERAAFIA DLRRILFDHG FFYLTGHGVD PKLIADVLET
AKRFFALPLE EKLKIEMVKS RHFRGYNRAG YEHTRGQQDW REQLDINTEG TPVEIGPETP
AWKRLLGPNQ WPEAIPELKP LLLTYQAEVT CVGIDVLKAI AVALDQPEDV FAQIYEPQPS
QLLKIIRYPG RDVAETDQGV GAHKNGGFVT VLLQDKVEGL RVQTEDGVWL DAPPVPGTFV
VNTGELLELA TNGFVRADVH DVVAPPAGIE RFSVAFFLGS RYDATIPVIT LPDELHRKER
GITVDLLNPI FREVGQNHLK SRLRSHPDVA RAHHADLLTP EQLAGQAVAQ AY
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