Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avi_7159 |
Symbol | |
ID | 7380325 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Agrobacterium vitis S4 |
Kingdom | Bacteria |
Replicon accession | NC_011981 |
Strand | + |
Start bp | 126525 |
End bp | 127853 |
Gene Length | 1329 bp |
Protein Length | 442 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 643641273 |
Product | hypothetical protein |
Protein accession | YP_002539570 |
Protein GI | 222102531 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.907788 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAACGTT TTGTTATTGC TGCACTTTTT GCCAGCACCA TCTTCTCGGC AAGCGCGCCA GCCTTTGCCG CAGATGTCAG TCAGTACATT CCCCTGCCAA CCTATCGCGT CGGGGCCTAT GCCTCCTCCG GCGAACTGTG GTGGGCGGGA GAGCGCGACT ATTTCCGCTA TATCAACGAG GTGGAAGGCG GCGTTGAGGG CGTGAAGCTC AACTATGAAG AGTTTGAAAC CGAATGGAGC CCGGACCGCA CCGTTGAAGT CTATGAGCGG GTCAAGGCGG GCAAGGACGG CTCGCCGCTG GCCTTCTTCT TCACCCACGG CACCCCTGCC ACCTATGCCC TGCTGGAAAA AGCCGCAGCC GACAAGATTC CGCTGATTGA TCCCGCAGGC GGCAAGACGG AAACCGTGGA TGGAACGGTG TTTCCCTACG CCTTCCCGCT GCTGTTCAGC TATTACAGTC AGGCCTCTAC CGGCATCAAT TATATTGCCT CCAAGGTCGG CGGTCTTGAT AAGCTGAAAG GCCTGAAGAT CGCAACCCTC TATCACGATA GTGCCTATGG CCGCGCCAGC CAGCCAGCAA TTGAGCTTCT GGCCAAGAAA TATGGCTTTG AGAATATTCA GATTCCGGTG GCCGATCCCG GCAACGAACA GTCACCACAA TGGCGCCAGA TCCGCGAGCA AAAGCCGGAT TGGGTTTTCC TGCGCACCTG GGGGGTCTCC ACCGTTGTTG CCCTCAAGAC GGCACAGCGC TTTGGCTTTC CAGCCGATCA TATCATTGGT GATGTCTGGG CCGGATCAGA GTCAGACGCG ATCCCCGCAG GCGCTGCCGC CATCGGTTAT TCAGCACTCG CACCTTATCC CGGCGGCACG GATTTTGAGA TCCACAAACG CCTGAAGGCC GAGATCCTCG ACAAGGGCAA ATCCGATTTG CGCGATCCGA AACTGTTTGG TGCGGTCAAT TACAATATCG GTCTCGTCAA CGCGGCATTG GCGGTTGAGG CGCTACGCAC CGGCTACAAG CATTTCGGCC CAAAGCCGCT GAATGGTGAG CAAGGCCGCT GGGCCTTTGA GCATCTGACC ATTGATGACA AGCGGTTGGA GCAAATCGGT TTCAAGGGCC TGCTGCAACC GATCAAAATC ACACCCACCG ACCACGAAGG TGGTGGTGCT GCCCGCATCC AGAGCTGGGA TGGCAAGAAA TGGGTGCTGA AGACCGATTG GATCAAGGCA GATCACGATC TTCTCAATCC GCTGATCAAG CAAGGGGCGG AAGCTTACGC CAAGGAACAC GGCATCACGC CTCGCACACC GGAAACAGAA ACCAATTGA
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Protein sequence | MKRFVIAALF ASTIFSASAP AFAADVSQYI PLPTYRVGAY ASSGELWWAG ERDYFRYINE VEGGVEGVKL NYEEFETEWS PDRTVEVYER VKAGKDGSPL AFFFTHGTPA TYALLEKAAA DKIPLIDPAG GKTETVDGTV FPYAFPLLFS YYSQASTGIN YIASKVGGLD KLKGLKIATL YHDSAYGRAS QPAIELLAKK YGFENIQIPV ADPGNEQSPQ WRQIREQKPD WVFLRTWGVS TVVALKTAQR FGFPADHIIG DVWAGSESDA IPAGAAAIGY SALAPYPGGT DFEIHKRLKA EILDKGKSDL RDPKLFGAVN YNIGLVNAAL AVEALRTGYK HFGPKPLNGE QGRWAFEHLT IDDKRLEQIG FKGLLQPIKI TPTDHEGGGA ARIQSWDGKK WVLKTDWIKA DHDLLNPLIK QGAEAYAKEH GITPRTPETE TN
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