Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avi_7149 |
Symbol | virH2 |
ID | 7380185 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Agrobacterium vitis S4 |
Kingdom | Bacteria |
Replicon accession | NC_011981 |
Strand | + |
Start bp | 115974 |
End bp | 117344 |
Gene Length | 1371 bp |
Protein Length | 456 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 643641263 |
Product | P-450 monooxygenase |
Protein accession | YP_002539560 |
Protein GI | 222102521 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG2124] Cytochrome P450 |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.472347 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATCTCAG TTGAGAATTA TCAACAAAAA ATTCCAAATA TTCGGCAGCG ATGCCTTTTC AACAATAGCT TCAGATTCCG CAAGGATCCT CTGTCATTGC TGTCTTCGTG CTGTCAAATT AACAGCCCTT TGATCGGCAT CGATAAGGGC TTCTATGTTG TCACTGCCCC TGAACTGATT GAATTGGTTC TTCATGACAA GCATCAAGTC TTTCGAAAGT CCCTTCCTGA TGACGATAGG GGCATGGTCA ATTTTGCTTC TTCGATCATG AATAGCTCGG GTGACGATTG GCGCCACAAG CGAAAGGTGT TGCAACCCGG CTTTAATCTC GACGCCGTTG CAAAGGGCGT GGATGCAACA ATCGAAATTA CCCAGGGCCA TCTCGATCAG TGGCAGGTCG AGCCTCCATC TTCCGACATC AGAAAATCCC TGCAACGGCT GTGTTTTGAC ATCGGCTGTC AATTTTTTCT CAAGACCACG CTTGGCGAGA AGGAACAATC CGCGTTCGTG ATCCTATCAG ATTTGATCAT AGCGAAGACG CGCGACGGTA TACGCTTTCC ACTCGGTCCA TTCGACAGGA CGGAGGCACG ACTTGCCAGC GCCCGCGATG CCGCGAAGGA ACTGGCTGGC GCTGCCCTTG CCCGTGCGCG ACAGCAGCGC GAGGGCAGAG ACAAGAGCGT TGCATCGCAC GACGGGTTCG AACGATCCTT CGATGAGGGG TCTGATGAGG ATGACAACTG GCTGCGCGAC GAGTTTTGCA CCATGATCCT CTCGGGGCTG GAGCCGATGT CTGCCGGACT TGCCTGGACC TTGCACTTGT TGACAGCGCA CCCGGACGTT CTGCAACGTG TGACCGCAGA AATAGATGCA TTGGCTATGA GCGGCGACGG CCCGATCAGT CTTGACGGAT TGCCCGAAAC AAGGGCTGCG CTCAAGGAGG CCCTGCGACT GTTCCCACCG GCCTGGCTGA CGGGGCGGAC TGTCTTTGAG GATACGGTGC TCGGCGACTT CCTTCTTCCA AAGGGGAGCG CCTTGATGAT CAGTCCCTGG GTCAATCACC GCAGTGGCCG CTATTTCGAC TTGCCCGAGC ACTATCGGCC CGACCGTTGG CTGGACGGCA CGCTGGAAAA GCGCTTGCCG CGCTACGCTT TTTTCCCCTT TGGCGGGGGC AGCCGACGCT GCATTGGCGA GCATTTCAGC ATGATCCACA TGACAGCCAT ATTGGTCTGT ATTTTGAGGC GCTTCACCTT GAAACGGATG CCACATACCA AAGTGCGACC CTATCCAGCA CTCGTTTTAC GCCCTTTGGG GGTCACTCTG ACTTTAACAC CCCGCGCTCC GGAAGCCGGA CTAGATAGGA ACTTCATATG A
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Protein sequence | MISVENYQQK IPNIRQRCLF NNSFRFRKDP LSLLSSCCQI NSPLIGIDKG FYVVTAPELI ELVLHDKHQV FRKSLPDDDR GMVNFASSIM NSSGDDWRHK RKVLQPGFNL DAVAKGVDAT IEITQGHLDQ WQVEPPSSDI RKSLQRLCFD IGCQFFLKTT LGEKEQSAFV ILSDLIIAKT RDGIRFPLGP FDRTEARLAS ARDAAKELAG AALARARQQR EGRDKSVASH DGFERSFDEG SDEDDNWLRD EFCTMILSGL EPMSAGLAWT LHLLTAHPDV LQRVTAEIDA LAMSGDGPIS LDGLPETRAA LKEALRLFPP AWLTGRTVFE DTVLGDFLLP KGSALMISPW VNHRSGRYFD LPEHYRPDRW LDGTLEKRLP RYAFFPFGGG SRRCIGEHFS MIHMTAILVC ILRRFTLKRM PHTKVRPYPA LVLRPLGVTL TLTPRAPEAG LDRNFI
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