| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_7132 |
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| Symbol | |
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| ID | 7380176 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011981 |
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| Strand | + |
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| Start bp | 107237 |
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| End bp | 108310 |
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| Gene Length | 1074 bp |
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| Protein Length | 357 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 643641254 |
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| Product | ABC transporter nucleotide binding/ATPase protein (spermidine/putrescine) |
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| Protein accession | YP_002539551 |
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| Protein GI | 222102512 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG3842] ABC-type spermidine/putrescine transport systems, ATPase components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGACATG AAACACAGCT GACAACAGTT CCGACGGATA GCGTTGCGAA GAATGTGATC
CAGAAAACCG CCCCTTCATC CTCTGCCCAC CATAATGATG TTGAGCTGGT GGCCGTGACC
AAACGCTATG GCTCCAGCAC TGCCGTTGAC ACCATTTCGC TGCGTATTCC GTCCGCCAGT
TATTGCTGTT TGCTGGGACC AAGTGGCTGC GGAAAGACCA CAACCTTGCG GATGATCGCC
GGACATGAAA TTGTCAGCGA TGGTGATATT CTGGTGCAGG ACCGCAACGT GACACTGGCA
CCCGCCGTTC AGCGCGGCAC CTCGATGATG TTTCAGAATT ACGCGCTGTT TCCCCATCTA
AGCGTGGTAG ATAACGTCGC ATTTTCGCTC AAGCTCAAAG GTGTGGCCAG GTCTGAGCGA
CGCCGCCAGG CGATGGACTA TCTGGCGCTG GTGCAGATGG AAGTACTGGC AGAACGGCTC
CCGGCGCAAT TGTCCGGTGG CCAGCAGCAG CGCGTAGCAC TTGCCCGTTC GCTGATCACC
CGGCCAAAGG TTTTGCTGCT GGATGAGCCG CTATCCGCGC TTGATCCATT TTTACGTATT
ACCATGCGCT CGGAATTGAA ACGTATTCAA CGCGAGCTGG GCATTACCTT CGTGCATGTC
ACCCACAGTC AGGAGGAGGC CATGGCTCTG TCGGACATGA TCGTGGTGAT GAATGGCGGT
GCAATCATGC AGGCAGGCCC TGCCCGCGAG GTCTTTGCCC GGCCCCTCAA CGCTTTTGTC
GCCCGCTTCA TTGGCGGACA TAATGTTTTA AACCTTGGCG GTCGGCAATT TTGTGTGCGG
GCTGACAAAT GCCGGATCGC AGGGGCCGAG GATGACAGAC ATACCATCGC GGAGGTGGTC
GGAGGCGAAT ATCAGGGCGC AATAGGCCGC CTTTCTTTGA TGACGGCCGA CAGACAACCG
ATCTCCGTAA TGGTCAGCGA TAACGACTAT TTTGCCTTTA GCCATTCCAT CGGTGATCGG
GTCAGCGTTT CATGGTCTGT GAAAGATGAA TGGGGCCTGG AAGTGGTGGG CTAA
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| Protein sequence | MRHETQLTTV PTDSVAKNVI QKTAPSSSAH HNDVELVAVT KRYGSSTAVD TISLRIPSAS
YCCLLGPSGC GKTTTLRMIA GHEIVSDGDI LVQDRNVTLA PAVQRGTSMM FQNYALFPHL
SVVDNVAFSL KLKGVARSER RRQAMDYLAL VQMEVLAERL PAQLSGGQQQ RVALARSLIT
RPKVLLLDEP LSALDPFLRI TMRSELKRIQ RELGITFVHV THSQEEAMAL SDMIVVMNGG
AIMQAGPARE VFARPLNAFV ARFIGGHNVL NLGGRQFCVR ADKCRIAGAE DDRHTIAEVV
GGEYQGAIGR LSLMTADRQP ISVMVSDNDY FAFSHSIGDR VSVSWSVKDE WGLEVVG
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