Gene Avi_7114 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvi_7114 
Symbol 
ID7380163 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAgrobacterium vitis S4 
KingdomBacteria 
Replicon accessionNC_011981 
Strand- 
Start bp94454 
End bp95137 
Gene Length684 bp 
Protein Length227 aa 
Translation table11 
GC content51% 
IMG OID643641241 
Producttransposase 
Protein accessionYP_002539538 
Protein GI222102499 
COG category[L] Replication, recombination and repair 
COG ID[COG3316] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTCGATT TCAAAGGCAG TCACTACCCG AAAGAAGTGA TTTTATACGC CTTATTTTTC 
TATGTCCGAT ATGCAGTTTC CTACCGCGAC CTGGAAGAGA TTATGGCCGA ACGCGGGGTC 
AATCTCGACC ACGCGACACT GAATAGATGG GTCGTGAAAT ACGCGCCGCT GATTGCCCTG 
CAAGCGAAGC GCCGGAAATC CAAACCCAGC GGCTCCTGGC GAATGGGTGA GACGTACATC 
GAGGTCAAAG GCCAGTGGAT GTACTTTTAT CGCGCCGTTG ACAAGCATGG CAAAACCCTT 
GATTTCATGC TATCCGAGCA TCGCGATGAG GCCGCCGCTA CCGATTTCTT CGCCCGCACC 
ATCGAGAACA ATGGTTGGCC CGAAAAGGTT GTCATCGACA AAAGCGGGGC GAACTTGGCA 
GGGCTGCAAA ACATGAATAT TCTGCTGCTA TTGCATGGCT GGTTCTGGCT GATCGAAGTT 
CTGCAAGTCA AATATCTCAA CAACATGATT GAGCAGGATC ACCGCTTTAT TAAGAAACTG 
ACCAGGCCAA TGAAGGGCTT CAAACGCTTT CAGTCCGCAT CAGCGACACT GGACGGCATC 
GAAGTCGCAC ATATGATCCG CAAGAAACAG TTTTCCACCA GCGTCCAATC GCCATTTCAA 
CAGTTCTCGG CACTCGCCAC ATAA
 
Protein sequence
MVDFKGSHYP KEVILYALFF YVRYAVSYRD LEEIMAERGV NLDHATLNRW VVKYAPLIAL 
QAKRRKSKPS GSWRMGETYI EVKGQWMYFY RAVDKHGKTL DFMLSEHRDE AAATDFFART 
IENNGWPEKV VIDKSGANLA GLQNMNILLL LHGWFWLIEV LQVKYLNNMI EQDHRFIKKL 
TRPMKGFKRF QSASATLDGI EVAHMIRKKQ FSTSVQSPFQ QFSALAT