Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avi_7110 |
Symbol | |
ID | 7380160 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Agrobacterium vitis S4 |
Kingdom | Bacteria |
Replicon accession | NC_011981 |
Strand | + |
Start bp | 91936 |
End bp | 92706 |
Gene Length | 771 bp |
Protein Length | 256 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 643641238 |
Product | transferase |
Protein accession | YP_002539535 |
Protein GI | 222102496 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1213] Predicted sugar nucleotidyltransferases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGCGCCA TCATGCTTGT AGCCGGTCGA GGTTCACGAC TTCGTAATCT TACGGACATG CGACCGAAAT GCCTCGTTCC TTTCCGGGGC AGGCCGCTTC TGGAGCTTTC AGTTGAGCGC CTGAAGGCAG GCGGTGTGGA AAAATTCACG TTTGTGGCGG GATACCGTTC CGAGGCAATC GAGGCGTTCA TCGAGACGCA TGAGATTGAT GCCGAAGTCG TCTTGAACCG TGATTGGGAC AGTACGAACA TGGTGCAATC GCTGTTTTGC GCGGCGGATC GTCTGGCGGC GGAACCGTGC ATCGTCAGCT ATGGCGACAT CTTCTTTGAA AGTGGCATTG TGCGGAATCT CATTTCCGCC CAGGGCGACC TTGTACTGGC CTATGATCAT AATGGCCGTA CCCTTTGGGA GCGACGCTTC AAGGACCCAC TTTCGGATAT AGAGAACTTC CGCATTGGTA CGGAGGGACG CCTGATCGCG ATTGGCGGGA GGGTGCAAGA TATCACGACG GTGCAGGGCC AATACATGGG CCTATTCAAG CTTACGCCGA CCGGTCTCGC CGAGATGCAG GATTTTTGCG CAAGCCTTAG TGCAGATCGT CGCCGTTCGA TCGATGTGAC GAGCACGTTC TCGGCTCTTC TGGGGCGCGG AACGCTGATT CGATGCGTAC CCAACCTCGA TCCGTGGGGC GAACTCGACT CTCCCGAAGA TATTCACTTC TTTGAAGCCT CCACCCCCCT CAACACTCCT GCTTTAGAAA GATCTTACTG A
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Protein sequence | MRAIMLVAGR GSRLRNLTDM RPKCLVPFRG RPLLELSVER LKAGGVEKFT FVAGYRSEAI EAFIETHEID AEVVLNRDWD STNMVQSLFC AADRLAAEPC IVSYGDIFFE SGIVRNLISA QGDLVLAYDH NGRTLWERRF KDPLSDIENF RIGTEGRLIA IGGRVQDITT VQGQYMGLFK LTPTGLAEMQ DFCASLSADR RRSIDVTSTF SALLGRGTLI RCVPNLDPWG ELDSPEDIHF FEASTPLNTP ALERSY
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