Gene Avi_7098 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvi_7098 
SymbolrhtB 
ID7380152 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAgrobacterium vitis S4 
KingdomBacteria 
Replicon accessionNC_011981 
Strand- 
Start bp85515 
End bp86114 
Gene Length600 bp 
Protein Length199 aa 
Translation table11 
GC content48% 
IMG OID643641231 
ProductRhtB family transporter 
Protein accessionYP_002539528 
Protein GI222102489 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1280] Putative threonine efflux protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACAAACC TTTGGATATA CGTAGGTGCG TGCCTCGCCA TCATCGCCAT TCCAGGACCA 
GCGCTTATCT ACATTCTGTC CCGAACCGTC GAAGGTGGCT TCCGCGCAGG CTTCTTATCA 
GCATCAGGTA TCGCTGTCGG CGCATTGGCG AATGCGCTTG CGTCCGCTGT GGGGCTTTCA 
TTGATATTCA AGACAATTCC TGCGTCGTTG ACCGTCGTGA AATATTTGGG CGCAGCCTAT 
TTGTTATTTC TTGCATATAA GGCCGTCTCC CCTGGTGCAT CATCGGCAAC ACAAATTGAC 
TCCGACCAGA CAAAATTCTT TCGCCAAGGC GTCATCGTGT CATTGCTGAA TCCCAAGGTC 
ACACTTTTCT TTGCGGCGTT CCTCCCGACG TTTATTGATC CAAGCCAAGG TTATTTCGTG 
CAAACCAGCT TTCTTGCGGT TACTTTCGTT ATAATCGCGT TTTTGTTTGA TATTTCGTTG 
GTTCTGACTT CAGGATATAC ACGACAATAC TTCTTAAGGC AATCTGGCGC AAACAACGTG 
CTGTTTAAGT ATGCCTCGGC AATTTGCCTA GTATTCGTGG CAAGTTTTGC TATTCGCTAA
 
Protein sequence
MTNLWIYVGA CLAIIAIPGP ALIYILSRTV EGGFRAGFLS ASGIAVGALA NALASAVGLS 
LIFKTIPASL TVVKYLGAAY LLFLAYKAVS PGASSATQID SDQTKFFRQG VIVSLLNPKV 
TLFFAAFLPT FIDPSQGYFV QTSFLAVTFV IIAFLFDISL VLTSGYTRQY FLRQSGANNV 
LFKYASAICL VFVASFAIR