Gene Avi_7092 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvi_7092 
Symbol 
ID7380148 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAgrobacterium vitis S4 
KingdomBacteria 
Replicon accessionNC_011981 
Strand
Start bp82343 
End bp83800 
Gene Length1458 bp 
Protein Length485 aa 
Translation table11 
GC content57% 
IMG OID643641227 
Productamidase 
Protein accessionYP_002539524 
Protein GI222102485 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0154] Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATGCGT CGAACGATCC CACAAAATGG ACGGCATCGG AGGCCAGTCT TGCCCTTGCC 
GCTAAACAGA TCGGCGCTGT GGAGCTTCTG GATGCCTATC TTGCCCGACA GGCCGCTCTG
GATGGTGAGA TAAACGCCGT TTGTGCGCTC AATCCAGACC TCGCCCGCAC GGTTGCGCAG
CAGGTCGATG CGGATCGCAT TGCAGGAAAA AGCCTGCCAA TTTTGGCAGG CCTGCCGATG
ACCATCAAGG ATTGCTTCGA CGTGGTGGGT TTGCCGACCA CGGCGGGCAT TCCGGACATG
GCATCCTACC GACCGCAGAC CGATGCGGAT GCTGTTGCAA ATCTTAGGCG TGCTGGTGCC
GTGTTTTATG GCAAGACCAA TACGCCGCTC GCGGCTGCCG ACCATCAAAC CTATAATCCG
CTGTTTGGAT TGACCCGCAA TCCCCATGAT CTCTCCAAAA CCGTTGGAGG CTCCTCAGGC
GGCGCGGCAG CCGCATTGGC GGCAGGCTTT ACCGCGCTTG AACTTGGGTC CGACATTGGC
GGCTCCATTC GCATTCCAAG CCATTATTGC GGCGTATATG GCCACAAATC CTCATGGGAT
ACTGTATCCA TGCGCGGGCA TATGCCACCA CCGCCCGGTC ATCTGGCGAA AAACCCCTTG
CTGGTCGCAG GCCCGATGGC GCGCTCGGCA CAGGATCTTT CTGTGGCGTT CGAGATTTTG
TCATCCGATT GCAATCGCAT TTTAAAACCT GCGCGACACA GCGCATTGGC GGATTTTCGC
TTTGGCGTCT GGGTCGATGA CAATCCTGTC GATCCCGTCT ATGCATCGGC AATTCTGGAT
TTTGCCGAAA GTTTGCGCAA ACAGGGCGCG AAAGTCGTCG AAATACCCGG CGGTCCCAGT
GGCGCTGATA GGCTGTTCGA TACCTATATC AAGATGCTGT TTGCCACGAT TGGCAGTGAA
CTGGATGACG ATGAAATCGC GCGCTACACA CAGGCTGGCA ACGACCCGGC AACAGGCGAA
TTTGGCCCAC TTCTCGCAGG CGCTGTTGTT GAAAGCCATC GCAAATTTGT GGAACAGGCG
CAAATGCAGG CCCGCTTTCA ATCGGTCTGG GCCAAGCAGT TTGAGACGCT CGACGTTCTT
CTTTGCCCGG TTTCAATGGG CACGGCCTTC CCCCACGATT GCGACGATGG CCATGGCCCT
GTGCCGCAGA TGAAAAGAAC AATTCAGATT GGCAACATAA GCCAGCCTTA TCTCGACAAT
TTGCGTTGGC CCGGCATTGC CACACTTTTG CATCTGCCAG CCACGGTCCG CCCGTTGCCC
CATCCGGTCA ACGGCATGCC TGCTGGCGTG CAGATCATTG GCCCTTATCT GGAGGACCGC
ACCACGCTGA CATTCGCAAA GCTGTGCGAT GAGGCCTTTG GCAGATCAGA AATGCCGCTC
CTGCCGCGCA AATCATAA
 
Protein sequence
MNASNDPTKW TASEASLALA AKQIGAVELL DAYLARQAAL DGEINAVCAL NPDLARTVAQ 
QVDADRIAGK SLPILAGLPM TIKDCFDVVG LPTTAGIPDM ASYRPQTDAD AVANLRRAGA
VFYGKTNTPL AAADHQTYNP LFGLTRNPHD LSKTVGGSSG GAAAALAAGF TALELGSDIG
GSIRIPSHYC GVYGHKSSWD TVSMRGHMPP PPGHLAKNPL LVAGPMARSA QDLSVAFEIL
SSDCNRILKP ARHSALADFR FGVWVDDNPV DPVYASAILD FAESLRKQGA KVVEIPGGPS
GADRLFDTYI KMLFATIGSE LDDDEIARYT QAGNDPATGE FGPLLAGAVV ESHRKFVEQA
QMQARFQSVW AKQFETLDVL LCPVSMGTAF PHDCDDGHGP VPQMKRTIQI GNISQPYLDN
LRWPGIATLL HLPATVRPLP HPVNGMPAGV QIIGPYLEDR TTLTFAKLCD EAFGRSEMPL
LPRKS