Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avi_7092 |
Symbol | |
ID | 7380148 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Agrobacterium vitis S4 |
Kingdom | Bacteria |
Replicon accession | NC_011981 |
Strand | + |
Start bp | 82343 |
End bp | 83800 |
Gene Length | 1458 bp |
Protein Length | 485 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 643641227 |
Product | amidase |
Protein accession | YP_002539524 |
Protein GI | 222102485 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0154] Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATGCGT CGAACGATCC CACAAAATGG ACGGCATCGG AGGCCAGTCT TGCCCTTGCC GCTAAACAGA TCGGCGCTGT GGAGCTTCTG GATGCCTATC TTGCCCGACA GGCCGCTCTG GATGGTGAGA TAAACGCCGT TTGTGCGCTC AATCCAGACC TCGCCCGCAC GGTTGCGCAG CAGGTCGATG CGGATCGCAT TGCAGGAAAA AGCCTGCCAA TTTTGGCAGG CCTGCCGATG ACCATCAAGG ATTGCTTCGA CGTGGTGGGT TTGCCGACCA CGGCGGGCAT TCCGGACATG GCATCCTACC GACCGCAGAC CGATGCGGAT GCTGTTGCAA ATCTTAGGCG TGCTGGTGCC GTGTTTTATG GCAAGACCAA TACGCCGCTC GCGGCTGCCG ACCATCAAAC CTATAATCCG CTGTTTGGAT TGACCCGCAA TCCCCATGAT CTCTCCAAAA CCGTTGGAGG CTCCTCAGGC GGCGCGGCAG CCGCATTGGC GGCAGGCTTT ACCGCGCTTG AACTTGGGTC CGACATTGGC GGCTCCATTC GCATTCCAAG CCATTATTGC GGCGTATATG GCCACAAATC CTCATGGGAT ACTGTATCCA TGCGCGGGCA TATGCCACCA CCGCCCGGTC ATCTGGCGAA AAACCCCTTG CTGGTCGCAG GCCCGATGGC GCGCTCGGCA CAGGATCTTT CTGTGGCGTT CGAGATTTTG TCATCCGATT GCAATCGCAT TTTAAAACCT GCGCGACACA GCGCATTGGC GGATTTTCGC TTTGGCGTCT GGGTCGATGA CAATCCTGTC GATCCCGTCT ATGCATCGGC AATTCTGGAT TTTGCCGAAA GTTTGCGCAA ACAGGGCGCG AAAGTCGTCG AAATACCCGG CGGTCCCAGT GGCGCTGATA GGCTGTTCGA TACCTATATC AAGATGCTGT TTGCCACGAT TGGCAGTGAA CTGGATGACG ATGAAATCGC GCGCTACACA CAGGCTGGCA ACGACCCGGC AACAGGCGAA TTTGGCCCAC TTCTCGCAGG CGCTGTTGTT GAAAGCCATC GCAAATTTGT GGAACAGGCG CAAATGCAGG CCCGCTTTCA ATCGGTCTGG GCCAAGCAGT TTGAGACGCT CGACGTTCTT CTTTGCCCGG TTTCAATGGG CACGGCCTTC CCCCACGATT GCGACGATGG CCATGGCCCT GTGCCGCAGA TGAAAAGAAC AATTCAGATT GGCAACATAA GCCAGCCTTA TCTCGACAAT TTGCGTTGGC CCGGCATTGC CACACTTTTG CATCTGCCAG CCACGGTCCG CCCGTTGCCC CATCCGGTCA ACGGCATGCC TGCTGGCGTG CAGATCATTG GCCCTTATCT GGAGGACCGC ACCACGCTGA CATTCGCAAA GCTGTGCGAT GAGGCCTTTG GCAGATCAGA AATGCCGCTC CTGCCGCGCA AATCATAA
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Protein sequence | MNASNDPTKW TASEASLALA AKQIGAVELL DAYLARQAAL DGEINAVCAL NPDLARTVAQ QVDADRIAGK SLPILAGLPM TIKDCFDVVG LPTTAGIPDM ASYRPQTDAD AVANLRRAGA VFYGKTNTPL AAADHQTYNP LFGLTRNPHD LSKTVGGSSG GAAAALAAGF TALELGSDIG GSIRIPSHYC GVYGHKSSWD TVSMRGHMPP PPGHLAKNPL LVAGPMARSA QDLSVAFEIL SSDCNRILKP ARHSALADFR FGVWVDDNPV DPVYASAILD FAESLRKQGA KVVEIPGGPS GADRLFDTYI KMLFATIGSE LDDDEIARYT QAGNDPATGE FGPLLAGAVV ESHRKFVEQA QMQARFQSVW AKQFETLDVL LCPVSMGTAF PHDCDDGHGP VPQMKRTIQI GNISQPYLDN LRWPGIATLL HLPATVRPLP HPVNGMPAGV QIIGPYLEDR TTLTFAKLCD EAFGRSEMPL LPRKS
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