Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avi_7085 |
Symbol | |
ID | 7380141 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Agrobacterium vitis S4 |
Kingdom | Bacteria |
Replicon accession | NC_011981 |
Strand | - |
Start bp | 76152 |
End bp | 76820 |
Gene Length | 669 bp |
Protein Length | 222 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 643641220 |
Product | transposase |
Protein accession | YP_002539517 |
Protein GI | 222102478 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG3316] Transposase and inactivated derivatives |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.0314847 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGCTGGGCA CAGCCAGCGC CGCAACACTG GCCGCAAGCG TCGATGTCCG GTGCCTGCGT TTGCGAAACG ACGTGGACCT TCGGTTCAAG TGCGCCATTT TCAGGGTGAG GTTATCCTTT GGGCGGTACG CTGGTACTGT CATTAAGGTT CGCGGACGAT GGACTTATCT CTACCGGGCT GTCGACAAAC TCGGCAACAC GATTGATTTT TATCTTTCCC CGACCCGCAA TGCCAAAGCG GCGAAGCGCT TTCTCGACAA AGCCTTAAAT GACCTGAAGG ATTGGGAGAC ACCGACCGTC ATCAACGCCG ACAAGGCACC GACCTACCGT ATCGCGCTTT CGCAACTGAA GACTAAAGGC AAATACCCCG CAGAGTTCAT GCACCGGCAG GTCAAATATC TGAACACCGT CATTGAGGCT GATCACGGCA AGCTGAAGCA GTTGATCAGA TCGGTGAGAG GGTTCAAAAC GCTGAAAACC GCCTACGCCA CGATCAAGGG TTTTGAGGTC ATGCGCGCTG TGCGCAAAGG TCAGGCAGCC ATTTTCAACC TGACGGGCGA CATTTGTGGA GAAGCAAGGA TCGATGAGCG TACTTTCGGT ATCGGGCCAA ACGCTCTCAC GGAAGCCTCG GCACTGCTCG CCCAGAACCG AGAAAGTCAG GCCGCTTGA
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Protein sequence | MLGTASAATL AASVDVRCLR LRNDVDLRFK CAIFRVRLSF GRYAGTVIKV RGRWTYLYRA VDKLGNTIDF YLSPTRNAKA AKRFLDKALN DLKDWETPTV INADKAPTYR IALSQLKTKG KYPAEFMHRQ VKYLNTVIEA DHGKLKQLIR SVRGFKTLKT AYATIKGFEV MRAVRKGQAA IFNLTGDICG EARIDERTFG IGPNALTEAS ALLAQNRESQ AA
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