| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_7079 |
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| Symbol | serA |
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| ID | 7380135 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011981 |
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| Strand | - |
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| Start bp | 69942 |
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| End bp | 70892 |
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| Gene Length | 951 bp |
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| Protein Length | 316 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 643641214 |
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| Product | D-3-phosphoglycerate dehydrogenase |
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| Protein accession | YP_002539511 |
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| Protein GI | 222102472 |
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| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0111] Phosphoglycerate dehydrogenase and related dehydrogenases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.633779 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGACTGGGG CGGAATTGGC ACCTGAAGCA ACAGAACTTC TTAAACGACA TGCAATCGAG
ATCGTTTATG CGGATGGCTA CAGCGGCTCG GAAAATCTCG CTGAGATCGC CAAAACACAC
GCGGTTGATG CGATCCTCGT CAGACAAGGC CAGATAAACG ATCAGGTCAT CGCGTCTTCC
TCCCGTCTTC GAGTGATCGC AAAACACGGC AGCGGCGTGG ACAATATCGA TCTCGACGCC
GCCACTTCCC ACAACATCCC GGTTCTGCGC GCCCTCGCCG CTAACGCACA GTCGGTCGCA
GAACTTGCGA TCACCCTGTC CGTGACGCTG ATGAAAGACA TCGGCAGCCT GAGCGACACC
GTGAAGGGCG GCGCTTGGCC GAAGACGAAA TATGTCGGAC GCGACCTCGC GGGCGCCTGC
TTCGGCATCA TCGGTTTTGG CGAGATCGGG CGCAGGACGG CGAAACTTGC GCAAGGCCTC
GGTATGGAAA CCATCGCATA CGACCCGTTT GCGGAGGACG CAGATGGCAC GCGCGTGAGC
CGCGACCTGT CGGACATCCT CGCGCAAAGC GATATCGTCA GCCTGCATTG CCCGCTGACA
CCGCAGACCC ATCACCTCAT CAATGCCGAG CGGCTGAAGG TGATGAAATC CACGGCCTTC
ATCGTCAACA CGTCGCGCGG CGCCGTCATC GATGAGGCGG CTCTTCTGGA TGCACTGAAG
GACGGCAGCA TCGCAGGTGC GGCACTCGAC AGTTTCGAGC AGGAACCACC GGCTGCCGAT
CACCCGTTCT GGGCGCTGCC AAACCTGATC GCCACCCCTC ACGTGGGCGG GGCAAGCCGA
TCAGCGCTGA GGAACATGGC GCTACAGAGC GCGCAGCACA TCGTCGATGT CCTCACCGGC
GCGCCCTTTG ATCGTCGGGC ACTCGCCAAC CAGAACCTCG CCCAGAACTA A
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| Protein sequence | MTGAELAPEA TELLKRHAIE IVYADGYSGS ENLAEIAKTH AVDAILVRQG QINDQVIASS
SRLRVIAKHG SGVDNIDLDA ATSHNIPVLR ALAANAQSVA ELAITLSVTL MKDIGSLSDT
VKGGAWPKTK YVGRDLAGAC FGIIGFGEIG RRTAKLAQGL GMETIAYDPF AEDADGTRVS
RDLSDILAQS DIVSLHCPLT PQTHHLINAE RLKVMKSTAF IVNTSRGAVI DEAALLDALK
DGSIAGAALD SFEQEPPAAD HPFWALPNLI ATPHVGGASR SALRNMALQS AQHIVDVLTG
APFDRRALAN QNLAQN
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