| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_7070 |
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| Symbol | |
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| ID | 7380128 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011981 |
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| Strand | + |
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| Start bp | 62486 |
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| End bp | 63337 |
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| Gene Length | 852 bp |
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| Protein Length | 283 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 643641207 |
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| Product | transcriptional regulator AraC family |
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| Protein accession | YP_002539504 |
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| Protein GI | 222102465 |
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| COG category | [K] Transcription |
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| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGAACGCAC AGGAAGAAAG ATCACGTGAC TGGGTATCGA TCCGTCGCCC GTTCGCAAAG
GCTGGTCTGG AAACGATGAC GGCGCGATAT ATCCAGCAAT CCTTTAAACC GCATGCACAT
GATGAATATG TCATAGGGAT CATTGAGGGA GGTGTTCATT CTGTTTGGTG TCGTGGCATT
CATCATAACA TGCCGTCAGG CACTGTGGTC ACCATGCATC CAGGTGATGT CCACTATGGC
AATGCGGCAA TTGCCGAGGG CTGGAAGCAG CGGATGATTT ACATCAGTGA AAATGAAATT
GGAAAATTCA TTAGCGACAT TGCAGGTGGA GACAAGTTTT TGCTACCTGA TTTCAAACAA
ACGTTTCATG ATCGGCCGGA TCTCGCCCAT TCCTTCGCGC AGTTTCATGA AGTCTTGCAT
AGCTCACCCT TGGCATTGGC ACGTGATGTT GCGCTTGATT CGATTATGCG CGTCACAATT
GGTGCCTTGT CGCCAGATTT CGTGAAGGCA AAAGACGCAA AGCAGCCGTC CGGTCGCATT
GCAGATGCCG TTGAGTTCTT GCACAATCGC ATCGAAGATG ATGTCACGCT GGACGAACTT
TGTGATGTCG CTGGTTTGAG GCGGCGGCAA ACCATTGAAG CATTCAAGCG GTGTACCGGA
TTACCCCCGC ACGCTTATCA CGTTATTCAA AAAGTGAAGG CCGTCAAAAC TATGCTACGT
GATGGTTTTT CGGCAACCGA GGCGGCCGCA CGAGCTGGAT TTGCTGACCA AAGCCACATG
ACGCGCCACT TCGTTGGGGT GGTCGGAATG ACACCTGGTG CCTACGCTCT GGATTGCCAA
AAAAAATATT AA
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| Protein sequence | MNAQEERSRD WVSIRRPFAK AGLETMTARY IQQSFKPHAH DEYVIGIIEG GVHSVWCRGI
HHNMPSGTVV TMHPGDVHYG NAAIAEGWKQ RMIYISENEI GKFISDIAGG DKFLLPDFKQ
TFHDRPDLAH SFAQFHEVLH SSPLALARDV ALDSIMRVTI GALSPDFVKA KDAKQPSGRI
ADAVEFLHNR IEDDVTLDEL CDVAGLRRRQ TIEAFKRCTG LPPHAYHVIQ KVKAVKTMLR
DGFSATEAAA RAGFADQSHM TRHFVGVVGM TPGAYALDCQ KKY
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