Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avi_7062 |
Symbol | traD |
ID | 7380122 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Agrobacterium vitis S4 |
Kingdom | Bacteria |
Replicon accession | NC_011981 |
Strand | - |
Start bp | 55302 |
End bp | 55547 |
Gene Length | 246 bp |
Protein Length | 81 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 643641201 |
Product | conjugal transfer protein TraD |
Protein accession | YP_002539498 |
Protein GI | 222102459 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.604351 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGGGCGG GCCTGGTGAG GCTTGATCGG ATGGCGAAGG CGATGACGAC AGAAGCGCGC AAAAAGGACA CGCGCGAAAA GATCGAGCTC GGTGCCCTGA TCGTCAAAGC GGGCTTGCGC TATGAGAAGC GGGCGCTGCT GCTCGGTCTT CTGATCGATG CGAACAAAAG GATCAAAGGC AATGAGGCGG AGCGATCGCG CCTGACGTCC ATCGGCGTGG AGGCTTTTGG CCATGACGGT GAATAG
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Protein sequence | MRAGLVRLDR MAKAMTTEAR KKDTREKIEL GALIVKAGLR YEKRALLLGL LIDANKRIKG NEAERSRLTS IGVEAFGHDG E
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