| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_7052 |
|---|
| Symbol | |
|---|
| ID | 7380114 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Agrobacterium vitis S4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011981 |
|---|
| Strand | - |
|---|
| Start bp | 45038 |
|---|
| End bp | 46090 |
|---|
| Gene Length | 1053 bp |
|---|
| Protein Length | 350 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 643641193 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_002539490 |
|---|
| Protein GI | 222102451 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 2 |
|---|
| Plasmid unclonability p-value | 0.0173877 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAAGG CCAGCTTCAC GCGTCTTTGC GCGGTCAACA GGGACATCGT CTATCTCGGC
ACCACGCCCG ATGACCAGGA AATGGCTACG CCGTTCACGG CCATCTGCCA GTACAATGCG
GGGGAATGGT CTTATGAGAC ATTCGCTTTT GCACTGGCGA GCTTGACGCT GTATCGCGAG
CCAGGCAGTC CTCACCGCGT CCTCTATGTG TTGGGTGAGA CTGGCACAGT CGTCAATTTC
CACACGAAGG ACCGCGAGAC AATCCTGGAT CTTTCCAAGG CTCCTCGCAC AAAACATAGG
CTTGGTTATC TGGTCAAGAT CAGGCAGATC GGCGATCACC TTTATGTTTG TGGTGACGGC
GGCCAAACCT ATCGACGCTC ATCGAATGGA CAATGGGAAG CCTTGGATGT GGAGTTCTAT
GATGGACCGG ATGCGATCAT GGATCCCACG TCGGAATTGA GCAAACTGGA CGCTCTGTTG
GATCAGAAAG CAAATAGAAC CCTCGAAAAC TTCGAGAAAA TTAAAAAGCT AAGAAAAGAA
AATTCGTCAA AAACGTTATG GGACCTTTCC GGCCTCTCCG AAGACAGCAT CTACTTCACC
GGAGAAAAAG AAACCGTTTA TTGGTTTGAC GGAGAGAAAA TCGCTGAAAT CCCAACCGAG
GCGGATCGTG GCCTCCTTTC TATCCTCGTG GAAAGCGAGG ATCGAGTCTG GGTTGCCGGC
CGTGATGGAA ATTTCCTGAT AGGCAACCAC AAGACGGGCT TTCGGGATCT CGACGCGCTT
CGTGGCATCG ATGGTTGGCC AAGCTTCAAC GGTATGACTA TGTTCAATGA ACGTCTCTAT
CTCTCCAGCT ATGTCGATCC TCGAGGGCTG TTCGTGTTCG ACGGCCACCA TGTCGAACAA
GTGCGCTCCG GTCTTACACC CGACATCGAC GATGTCTCCG CCGTCGAGGC AGTTGATGGT
GTGCTGTGGG TCATGGGCCG CAAGGACTTG CTGCGCTATG ACGGCACGCA CTGGGAGCGC
ATCGATTTTC CCGGCAATGA TCTGTTGAGG TGA
|
|---|
| Protein sequence | MKKASFTRLC AVNRDIVYLG TTPDDQEMAT PFTAICQYNA GEWSYETFAF ALASLTLYRE
PGSPHRVLYV LGETGTVVNF HTKDRETILD LSKAPRTKHR LGYLVKIRQI GDHLYVCGDG
GQTYRRSSNG QWEALDVEFY DGPDAIMDPT SELSKLDALL DQKANRTLEN FEKIKKLRKE
NSSKTLWDLS GLSEDSIYFT GEKETVYWFD GEKIAEIPTE ADRGLLSILV ESEDRVWVAG
RDGNFLIGNH KTGFRDLDAL RGIDGWPSFN GMTMFNERLY LSSYVDPRGL FVFDGHHVEQ
VRSGLTPDID DVSAVEAVDG VLWVMGRKDL LRYDGTHWER IDFPGNDLLR
|
|---|
| |