| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_7035 |
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| Symbol | parB |
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| ID | 7380231 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011981 |
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| Strand | + |
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| Start bp | 33780 |
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| End bp | 35495 |
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| Gene Length | 1716 bp |
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| Protein Length | 571 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 643641179 |
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| Product | plasmid partitioning protein |
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| Protein accession | YP_002539476 |
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| Protein GI | 222102437 |
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| COG category | [K] Transcription |
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| COG ID | [COG1475] Predicted transcriptional regulators |
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| TIGRFAM ID | [TIGR00180] ParB-like partition proteins |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAGTTGA TTACAGCCGA TCCGCGCAGT CTGAAGGACA ATCCCGACCG GTCGCGCCAG
TCGAAATCCT CACCACAGTC CGACGCGCTA TTGTGCGCAT CGATCAGGGC TATCGGTGTC
GTGCAGCCAC CGATCGTCAA ACTCGATCCG GAGGGCGGCA ACAGTTACAT CATCGTCTTC
GGCCATCGAC GTGCAGCACA AGCCATCGCC GCGGATCTCG TGGAAATCCC GCTGCTGCTG
GCAGATCCCT CCGACGATCT CGGCGCCATG CAGTCTTTTG CCGAAAACAT CGCCCGCGAA
CCGCTGAATC CGGTCGATCA ATGGTGCGCC ATCGAGCGGC TGGTAGCTCT CGGATGGACC
GAGGAGTCGA TCGCCATGGC GCTGGCACTT CCGAGCCGGC AGATCCGCAA GCTGCGGTTT
CTGGCCAATA TCCTGCCCGC GATGCTCGAC CAGATGGCGC GCGGTGACAT GCCGAACGAG
CAGCAACTGC GCACAATCGC CGCCGCCGGA CAGGATGAGC AGGCCGAGGT GTGGAAGAAG
TACAAGCCGA AGAAGCAGGA CCCGCAGGTT TCGTGGTGGG AGGTTGCCCG CGCACTGACC
ACGACCCGGA TGCTCGCCAA ACATGCAAGC TTCGGCGACG ATCTGGCACA GGCTTACGGC
ATCACCTGGG TCGAGGACCT GTTTGCTCCC GCCGATGAGG ACAGCCGCTA TACCACCGAC
GTCGAGGCGT TTCTCGGGGC GCAGCAGGAG TGGCTGGCCA ACAATCTGCC CAAGCGCGGT
TCGGTCATCG AGGCCAATGA ATACGGCCAG GCCAAGCTGC CTGCCAAAGC GCAACAGGTC
TACGGCAAGC CGGGCAAGGG TGACCTGACC GGATGGTACA TCAACGCGCG AGACGGCTCG
GTTCAGTCGG TTGCCTACCG CATGCCCGAG GCTAAGAAGC CCAAGCTGGT CAAGGATCTC
GATGGTGTCG AAACCATCGT CGAGGAGGTT GAGACGCCGA AAGTGCGGCC CGATGTGACC
CAGAAGGGTC TCGACATGAT CGGCGACTTG CGGACGGACG CTCTGCACGA GGCGCTCGCG
CGTGCACCGA TCGAGGACGA CACGTTGATG GCTTTGCTCA TTCTCGCCTT CACCGGCATG
AATGTCACGG TTGCCAGCGG TGCATCGGAC AATCCCTATG GTCATGCGAA ATGCGGCCCG
CATGCTGCTA GGCTGATTGG CGAGGACGGC AAGCTGTCCT TCGATCGTGA GACACTGCTG
CAGGCTGCGC GCTCGGTCCT GGTCGAAGTC CTGTCTCTTC GGCGTAATCG CTCCGATAGC
GGCCTGATCG CGCGTATTGC CGGCGACGCC ATCGGGGCTG ATCAATTCCT GCCAAATATG
GCAACCGAAG ACTTCCTTTC ATGCCTTTCA CGCACTGCGC TGGAGACGAC CGCAGAAACG
GCGGGCGTGC CCGGTCGGAT CAAGGTGAAG GATACCCGCG CGGCTCTGGT CGAGCATTTT
GCCGAGGACA AGCTGGTGCA TCCGGCAGCG CTGCTCGCGC CTTCCACGGA CGACGTGCGG
TCCTGGGCTG GACGTTTTGC CAGCGTCGAT AGCGGATCGG AGGATGTCCG CGACGATCTC
GATGCGCTCG AAGATCAGCT TTCGGGTGGT GACCTGGTTG ACCATTCCGC CGTCGAGGAA
GAGGCCGGCG AGGGTTTCCG CGAGGCCGCC GAATAG
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| Protein sequence | MQLITADPRS LKDNPDRSRQ SKSSPQSDAL LCASIRAIGV VQPPIVKLDP EGGNSYIIVF
GHRRAAQAIA ADLVEIPLLL ADPSDDLGAM QSFAENIARE PLNPVDQWCA IERLVALGWT
EESIAMALAL PSRQIRKLRF LANILPAMLD QMARGDMPNE QQLRTIAAAG QDEQAEVWKK
YKPKKQDPQV SWWEVARALT TTRMLAKHAS FGDDLAQAYG ITWVEDLFAP ADEDSRYTTD
VEAFLGAQQE WLANNLPKRG SVIEANEYGQ AKLPAKAQQV YGKPGKGDLT GWYINARDGS
VQSVAYRMPE AKKPKLVKDL DGVETIVEEV ETPKVRPDVT QKGLDMIGDL RTDALHEALA
RAPIEDDTLM ALLILAFTGM NVTVASGASD NPYGHAKCGP HAARLIGEDG KLSFDRETLL
QAARSVLVEV LSLRRNRSDS GLIARIAGDA IGADQFLPNM ATEDFLSCLS RTALETTAET
AGVPGRIKVK DTRAALVEHF AEDKLVHPAA LLAPSTDDVR SWAGRFASVD SGSEDVRDDL
DALEDQLSGG DLVDHSAVEE EAGEGFREAA E
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