Gene Avi_7032 details

Gene Information

• Locus tag: Avi_7032
• ID: 7380228
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Agrobacterium vitis S4
• Kingdom: Bacteria
• Replicon accession: NC_011981
• Strand: +
• Start bp: 30546
• End bp: 31193
• Gene Length: 648 bp
• Protein Length: 215 aa
• Translation table: 11
• GC content: 52%
• IMG OID: 643641176
• Product: transcriptional regulator TetR family
• Protein accession: YP_002539473
• Protein GI: 222102434
• COG category: [K] Transcription
• COG ID: [COG1309] Transcriptional regulator

Plasmid Coverage information

• Num covering plasmid clones: 10
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCAGAGG TAGGGAATAC GGGCACCAAA CGGAGGCCGG TTCAGGCAAG ATCACAAAAA 
ATGAAGATGG CGATTATGGA ATCGACCCAT GCCGTGATGC GTGAACAGGG TGTGCGCGCC 
GTGACCACCA ATGCCGTTTC TGCCCATTCT GGTATTAAGG TCGGCTCGAT TTATGACTAC 
TTCCCCAACA AGGAAGCCAT TATTGCCGAA ATCTATGAGG AAAAGTTGGC GCAGGTGCGG 
GCTTTTCTGG AAGCCGGATC AGAAAAAATC GAGGCAGATG ACTGGCAGAT CCAATTGGCT 
GCACTTATTC GTGAGACATG GGTTTACCAG CTGTCGATCG GGCTGGACCG CACCATTGTT 
GATGCTGCTT ATTATTATGA GACCCTGTTT CCCATTGCCC AGCAGCATGC AAGGTTGGTT 
GCCTCAAACT ACGTGGAGCT GTTGTCCCAT CTTGGCTCAA CCTGGTCGCA TGAGCAACTT 
TTTGATCTGG GTATCAGCCT TTACACGCTC GTCAACGCCA ATTGGAGTTA TTGGCGTTTG 
ACAGGCACGG ATGATCAAAT CGCGATCGAG CGACAGATCG TGTTGACGAT CACGCTGATC 
ACGCCCACCC TGACAGCCTC GGCAAGCTCT CATAGCCCAG CGTGTTGA 

 

Protein sequence

MAEVGNTGTK RRPVQARSQK MKMAIMESTH AVMREQGVRA VTTNAVSAHS GIKVGSIYDY 
FPNKEAIIAE IYEEKLAQVR AFLEAGSEKI EADDWQIQLA ALIRETWVYQ LSIGLDRTIV 
DAAYYYETLF PIAQQHARLV ASNYVELLSH LGSTWSHEQL FDLGISLYTL VNANWSYWRL 
TGTDDQIAIE RQIVLTITLI TPTLTASASS HSPAC