| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_7027 |
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| Symbol | |
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| ID | 7380224 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011981 |
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| Strand | - |
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| Start bp | 25694 |
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| End bp | 26662 |
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| Gene Length | 969 bp |
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| Protein Length | 322 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 643641172 |
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| Product | ABC transporter nucleotide binding/ATPase protein (oligopeptide) |
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| Protein accession | YP_002539469 |
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| Protein GI | 222102430 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG0444] ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component |
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| TIGRFAM ID | [TIGR01727] oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCCTGC TCAAGATTAC CGATCTCTCT GTGGGTTTTG ATACGCCAGA CGGCCAAGTG
AAGGCCGTAC AAGGCCTGAA TCTGACACTC AATCGCGGTG AAACGCTTGG GATTGTTGGC
GAAAGCGGCT CTGGCAAAAG TCAGGCCTCC TTTGCCATCA TGGGGCTTTT GGCGCGCAAT
GGCAGGGCCT CCGGCTCGGT GCTGTTTGAC GGTCAGGAAA TCCTCAATGC GCCTGCCGCA
GTGCTCAACC CCATTCGCGG CGCGCGCATT GCCATGGTGT TTCAAGACCC GATGACCTCG
CTCAACCCCT ATATGCGCAT CTCCGATCAG ATGGCTGAGG TGCTGATCTA TCAAAAGGGT
ATGTCCAAGC GCGATGCCAT GGTGGAATGC ATCCGCATGC TGGATGCGGT GAAAATCCCC
GATGCCAAAT CCCGCATCCG GCTTTATCCG CATGAATTTT CCGGCGGCAT GCGTCAGCGG
GTGATGATTG CCATGGCCCT GCTCTGTCGC CCCGATCTAT TGATTGCCGA TGAGCCGACC
ACTGCCCTCG ATGTGACCGT GCAGGCGCAG ATCATGGGGC TGCTGCGCGA TTTGCAATCC
GAATTCGGCA TGGCAATGAT TTTGGTCACG CACGATCTCG GTGTGGTGGC AGGCTCCTGC
GAGCGGGTTC TGGTGCTTTA CGGTGGCCGG GTAATGGAAA CGGGACCAGC GGAAGCGCTG
TTTGCATCGC CATCGCATCC CTATACCCAA GGCTTGCTGC GCGCCATTCC CCGTGTGGAT
CGCGAGGATG AGAGGCTGCG CACCATTCCC GGCGTGCCGC CAAATATGAT GAACATGCCG
CGTGGCTGTC CCTTTTCGCC CCGGTGCGAT TATGTGATTG CCGAGTGCAA CGTTGCACCG
CCTCCGCTTG AAAATTTCGC GCCAGATCGC GCCCGCGCAT GCACACGCCC CGTGGAGGAA
TTGGTATGA
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| Protein sequence | MTLLKITDLS VGFDTPDGQV KAVQGLNLTL NRGETLGIVG ESGSGKSQAS FAIMGLLARN
GRASGSVLFD GQEILNAPAA VLNPIRGARI AMVFQDPMTS LNPYMRISDQ MAEVLIYQKG
MSKRDAMVEC IRMLDAVKIP DAKSRIRLYP HEFSGGMRQR VMIAMALLCR PDLLIADEPT
TALDVTVQAQ IMGLLRDLQS EFGMAMILVT HDLGVVAGSC ERVLVLYGGR VMETGPAEAL
FASPSHPYTQ GLLRAIPRVD REDERLRTIP GVPPNMMNMP RGCPFSPRCD YVIAECNVAP
PPLENFAPDR ARACTRPVEE LV
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