| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_7026 |
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| Symbol | |
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| ID | 7380223 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011981 |
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| Strand | - |
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| Start bp | 24717 |
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| End bp | 25697 |
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| Gene Length | 981 bp |
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| Protein Length | 326 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 643641171 |
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| Product | ABC transporter nucleotide binding/ATPase protein (oligopeptide) |
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| Protein accession | YP_002539468 |
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| Protein GI | 222102429 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG0444] ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component |
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| TIGRFAM ID | [TIGR01727] oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCACAG CACCACTTCT CAAGGCTGAG AACCTGCATG TGACCTTTGA GCGCAAAACT
GGCGGTTTTC CATGGCAGAA GCCGCGTATC CTGCATGCCG TCAATGGCGT GAATTTTGAG
CTGCGGGCTG GCGAAACGCT GGGCATTGTC GGCGAATCCG GCAGCGGAAA ATCCACCCTC
GCCCGCGCCA TCATCCGTAT GCTGGATGCC TCGGGCAGCG TGATCTGGCA GGGCAATACG
GATCTTTTGC GCCTGTCACC ACGAGAAATG TTGAAACATC GCGCTGATAT CCAGATGATC
TTTCAAGACC CTCTGGCCAG CCTCAATCCG CGCATGACAG TGGGCCAGAT CATTTCAGAG
ACGCTGATCA CCCATCACCA CGGCCTGTCC TCCAAGGAGA TCAAGGCGCG GGTGCAGGCG
GCCATGGATC AGGTAGGCCT GCTGCCCAGC CTGATCAACC GCTATCCGCA CGAGTTTTCC
GGCGGTCAGT GTCAGCGCAT CGGCATTGCC CGCGCCTTGA TTGTCGAGCC AAAGCTGATC
ATCTGCGATG AGCCGGTCTC GGCGCTGGAT GTATCCATTC AGGCGCAGGT GATCAACCTG
TTGATGGATC TGCAAAAGAA TCTGGGGCTG GCGCTGATTT TCATTGCCCA TGATCTGAGT
GTCGTCAAAC ACATCTCAAC ACGGGTAATG GTGATGTATC TTGGCCGCAC GGTCGAGATT
GCCGATCGCG ATACGCTCTA TGCCAATCCG CAGCATCCCT ACACGCAGGC GCTGCTCTCT
GCGATTCCCA TTCCCGATCC CAAGCTGGAG CGCGAAAAGA TCGTGATCCC GCTGGAAGGG
GAATTGCCAA GCCCGATGTC TCCCCCTTCC GGCTGTGTGT TCCGCACCCG CTGTCCACGC
GCCGAAGACC GCTGCGCGGC GGAGGTTCCG GTTTTGCAAG GCGACGTGCA CGCGGTTGCC
TGCCATTTTC GGGGAGCGTG A
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| Protein sequence | MSTAPLLKAE NLHVTFERKT GGFPWQKPRI LHAVNGVNFE LRAGETLGIV GESGSGKSTL
ARAIIRMLDA SGSVIWQGNT DLLRLSPREM LKHRADIQMI FQDPLASLNP RMTVGQIISE
TLITHHHGLS SKEIKARVQA AMDQVGLLPS LINRYPHEFS GGQCQRIGIA RALIVEPKLI
ICDEPVSALD VSIQAQVINL LMDLQKNLGL ALIFIAHDLS VVKHISTRVM VMYLGRTVEI
ADRDTLYANP QHPYTQALLS AIPIPDPKLE REKIVIPLEG ELPSPMSPPS GCVFRTRCPR
AEDRCAAEVP VLQGDVHAVA CHFRGA
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